Conservation of cofitness between HSERO_RS21530 and HSERO_RS08530 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21530 cytochrome C550 1.0 HSERO_RS08530 glycine/betaine ABC transporter permease 0.64 12
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS01680 cytochrome C550 0.47 RR42_RS04810 glycine/betaine ABC transporter permease low > 128
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 0.37 H281DRAFT_03486 osmoprotectant transport system permease protein low > 103
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein 0.60 QEN71_RS19715 ABC transporter permease low > 153
Paraburkholderia graminis OAS925 0.55 ABIE53_000626 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) 0.38 ABIE53_001495 osmoprotectant transport system permease protein low > 113
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase 0.53 PFLU_RS04065 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase 0.53 PFLU_RS04065 ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.43 PS417_24705 D-alanyl-D-alanine carboxypeptidase 0.53 PS417_04025 glycine/betaine ABC transporter permease low > 88
Pseudomonas putida KT2440 0.43 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.56 PP_0871 putative Glycine betaine/carnitine/choline ABC transporter, permease protein low > 96
Marinobacter adhaerens HP15 0.42 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase 0.29 HP15_995 binding-protein-dependent transport systems inner membrane component — —
Pseudomonas sp. RS175 0.42 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC 0.53 PFR28_00117 Osmoprotectant import permease protein OsmY low > 88
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_15330 D-alanyl-D-alanine carboxypeptidase 0.54 AO356_07290 glycine/betaine ABC transporter permease low > 104
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.53 PfGW456L13_5062 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 0.54 Psyr_4252 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_06455 D-alanyl-D-alanine carboxypeptidase 0.53 AO353_05425 glycine/betaine ABC transporter permease 0.29 62
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.54 Pf6N2E2_3330 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 0.54 Psyr_4252 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.53 Pf1N1B4_1131 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) — —
Rahnella sp. WP5 0.38 EX31_RS07145 serine hydrolase 0.24 EX31_RS23950 ABC transporter permease low > 89
Enterobacter asburiae PDN3 0.36 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase 0.46 EX28DRAFT_1487 ABC-type proline/glycine betaine transport systems, permease component low > 76
Pantoea sp. MT58 0.36 IAI47_07170 serine-type D-Ala-D-Ala carboxypeptidase DacD 0.50 IAI47_09780 ABC transporter permease low > 76
Enterobacter sp. TBS_079 0.36 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC 0.52 MPMX20_02069 Osmoprotectant import permease protein OsmY low > 85
Erwinia tracheiphila SCR3 0.36 LU632_RS16390 dacA D-alanyl-D-alanine carboxypeptidase DacA 0.48 LU632_RS12280 ABC transporter permease low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.51 GFF1779 Putative ABC transporter membrane protein low > 78
Sinorhizobium meliloti 1021 0.25 SMc01188 penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein 0.44 SMa1465 ABC transporter permease — —
Agrobacterium fabrum C58 0.24 Atu1499 penicillin binding protein 0.24 Atu0196 ABC transporter, membrane spanning protein (proline/glycine/betaine) low > 89

Not shown: 57 genomes with orthologs for HSERO_RS21530 only; 0 genomes with orthologs for HSERO_RS08530 only