Conservation of cofitness between HSERO_RS12675 and HSERO_RS07725 in Herbaspirillum seropedicae SmR1

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12675 AraC family transcriptional regulator 1.0 HSERO_RS07725 membrane protein 0.31 20
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.15 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.15 PFLU_RS18920 outer membrane protein assembly factor low > 109
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_156 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.16 Pf1N1B4_3997 Uncharacterized protein YtfM precursor — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04312 transcriptional regulator, AraC family with amidase-like domain 0.49 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA low > 103
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_6090 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.16 Pf6N2E2_144 Uncharacterized protein YtfM precursor low > 103
Pseudomonas simiae WCS417 0.45 PS417_09670 AraC family transcriptional regulator 0.15 PS417_16970 membrane protein low > 88
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_2369 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.15 PfGW456L13_2601 Uncharacterized protein YtfM precursor low > 87
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_19580 AraC family transcriptional regulator 0.15 AO353_27865 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_21045 AraC family transcriptional regulator 0.16 AO356_01050 hypothetical protein low > 104
Pseudomonas sp. RS175 0.44 PFR28_02891 HTH-type transcriptional regulator CdhR 0.16 PFR28_02752 Translocation and assembly module subunit TamA low > 88
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS04350 helix-turn-helix domain-containing protein 0.48 QEN71_RS25050 autotransporter assembly complex family protein low > 153
Variovorax sp. OAS795 0.38 ABID97_RS26935 GlxA family transcriptional regulator 0.24 ABID97_RS24415 BamA/TamA family outer membrane protein low > 91
Variovorax sp. SCN45 0.38 GFF5573 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.24 GFF2183 Outer membrane component of TAM transport system low > 127
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS28635 AraC family transcriptional regulator 0.52 RR42_RS16040 membrane protein low > 128
Enterobacter sp. TBS_079 0.34 MPMX20_02687 HTH-type transcriptional regulator CdhR 0.11 MPMX20_00503 Translocation and assembly module subunit TamA low > 85
Serratia liquefaciens MT49 0.34 IAI46_16680 GlxA family transcriptional regulator 0.11 IAI46_01770 outer membrane protein assembly factor low > 86
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0781 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.11 EX28DRAFT_3406 Outer membrane protein 0.52 63
Klebsiella michiganensis M5al 0.32 BWI76_RS12980 AraC family transcriptional regulator 0.10 BWI76_RS02775 outer membrane protein assembly factor low > 92
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS23400 AraC family transcriptional regulator 0.52 RALBFv3_RS04420 outer membrane protein assembly factor low > 76
Ralstonia solanacearum UW163 0.30 UW163_RS16650 AraC family transcriptional regulator 0.52 UW163_RS09250 outer membrane protein assembly factor — —
Pectobacterium carotovorum WPP14 0.27 HER17_RS21035 transcriptional regulator FtrA 0.12 HER17_RS03980 autotransporter assembly complex protein TamA low > 75
Escherichia coli ECOR38 0.24 HEPCGN_26900 ftrA transcriptional regulator FtrA 0.10 HEPCGN_10200 tamA autotransporter assembly complex protein TamA low > 87
Escherichia coli ECRC102 0.23 NIAGMN_25195 ftrA transcriptional regulator FtrA 0.10 NIAGMN_09850 tamA autotransporter assembly complex protein TamA — —
Escherichia coli ECRC99 0.23 KEDOAH_27380 ftrA transcriptional regulator FtrA 0.10 KEDOAH_16155 tamA autotransporter assembly complex protein TamA — —
Escherichia coli ECRC98 0.23 JDDGAC_03560 ftrA transcriptional regulator FtrA 0.10 JDDGAC_15640 tamA autotransporter assembly complex protein TamA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.13 Psyr_2478 surface antigen (D15):Surface antigen variable number low > 86
Escherichia coli ECRC100 0.23 OKFHMN_01050 ftrA transcriptional regulator FtrA 0.10 OKFHMN_12000 tamA autotransporter assembly complex protein TamA — —
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.13 Psyr_2478 surface antigen (D15):Surface antigen variable number low > 86
Escherichia coli ECRC101 0.23 MCAODC_16875 ftrA transcriptional regulator FtrA 0.10 MCAODC_02515 tamA autotransporter assembly complex protein TamA low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF2648 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.21 GFF671 Surface antigen (D15) precursor low > 90
Shewanella sp. ANA-3 0.20 Shewana3_3975 transcriptional regulator (RefSeq) 0.10 Shewana3_1894 surface antigen (D15) (RefSeq) low > 73
Shewanella amazonensis SB2B 0.19 Sama_3593 AraC family transcriptional regulator (RefSeq) 0.10 Sama_1616 hypothetical protein (RefSeq) low > 62
Phaeobacter inhibens DSM 17395 0.19 PGA1_c15870 transcriptional regulator, AraC family 0.06 PGA1_c05440 surface antigen-like protein low > 62
Alteromonas macleodii MIT1002 0.17 MIT1002_02277 Carnitine catabolism transcriptional activator 0.09 MIT1002_04048 Autotransporter assembly factor TamA low > 70

Not shown: 14 genomes with orthologs for HSERO_RS12675 only; 34 genomes with orthologs for HSERO_RS07725 only