Conservation of cofitness between HSERO_RS22035 and HSERO_RS02985 in Herbaspirillum seropedicae SmR1

23 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Herbaspirillum seropedicae SmR1	1.0	HSERO_RS22035		tRNA 2-thiocytidine biosynthesis protein TtcA	1.0	HSERO_RS02985		transcriptional regulator	0.28	20
Pantoea sp. MT58	0.64	IAI47_09475		tRNA 2-thiocytidine(32) synthetase TtcA	0.30	IAI47_05220		substrate-binding domain-containing protein	low	> 76
Pseudomonas fluorescens FW300-N2E2	0.61	Pf6N2E2_5711		tRNA(Cytosine32)-2-thiocytidine synthetase	0.25	Pf6N2E2_322		Transcriptional regulator, LacI family	low	> 103
Pseudomonas fluorescens FW300-N1B4	0.60	Pf1N1B4_3491		tRNA(Cytosine32)-2-thiocytidine synthetase	0.25	Pf1N1B4_4095		Transcriptional regulator, LacI family	—	—
Pseudomonas fluorescens FW300-N2C3	0.60	AO356_19000		tRNA 2-thiocytidine biosynthesis protein TtcA	0.25	AO356_22285		LacI family transcriptional regulator	—	—
Pseudomonas syringae pv. syringae B728a	0.60	Psyr_3705		conserved hypothetical protein	0.35	Psyr_4696		transcriptional regulator, LacI family	low	> 86
Pseudomonas syringae pv. syringae B728a ΔmexB	0.60	Psyr_3705		conserved hypothetical protein	0.35	Psyr_4696		transcriptional regulator, LacI family	low	> 86
Pseudomonas sp. RS175	0.60	PFR28_03236		tRNA-cytidine(32) 2-sulfurtransferase	0.24	PFR28_02584		HTH-type transcriptional repressor CytR	low	> 88
Pseudomonas simiae WCS417	0.60	PS417_16415		tRNA 2-thiocytidine biosynthesis protein TtcA	0.35	PS417_15460		GntR family transcriptional regulator	low	> 88
Cupriavidus basilensis FW507-4G11	0.60	RR42_RS01445		tRNA 2-thiocytidine biosynthesis protein TtcA	0.41	RR42_RS27820		GntR family transcriptional regulator	low	> 128
Ralstonia sp. UNC404CL21Col	0.59	ABZR87_RS05700		tRNA 2-thiocytidine(32) synthetase TtcA	0.37	ABZR87_RS12445		LacI family DNA-binding transcriptional regulator	low	> 80
Ralstonia solanacearum PSI07	0.59	RPSI07_RS23130		tRNA 2-thiocytidine(32) synthetase TtcA	0.38	RPSI07_RS16480		LacI family DNA-binding transcriptional regulator	low	> 81
Pseudomonas fluorescens SBW25-INTG	0.59	PFLU_RS18455		tRNA 2-thiocytidine(32) synthetase TtcA	0.35	PFLU_RS17445		LacI family DNA-binding transcriptional regulator	low	> 109
Pseudomonas fluorescens SBW25	0.59	PFLU_RS18455		tRNA 2-thiocytidine(32) synthetase TtcA	0.35	PFLU_RS17445		LacI family DNA-binding transcriptional regulator	low	> 109
Ralstonia solanacearum IBSBF1503	0.59	RALBFv3_RS10245		tRNA 2-thiocytidine(32) synthetase TtcA	0.38	RALBFv3_RS00990		LacI family transcriptional regulator	low	> 76
Ralstonia solanacearum UW163	0.59	UW163_RS03335		tRNA 2-thiocytidine(32) synthetase TtcA	0.38	UW163_RS14300		LacI family transcriptional regulator	—	—
Ralstonia solanacearum GMI1000	0.59	RS_RS00865		tRNA 2-thiocytidine(32) synthetase TtcA	0.38	RS_RS09035		LacI family DNA-binding transcriptional regulator	low	> 80
Paraburkholderia graminis OAS925	0.59	ABIE53_000036		tRNA 2-thiocytidine biosynthesis protein TtcA	0.38	ABIE53_002835		DNA-binding LacI/PurR family transcriptional regulator	low	> 113
Paraburkholderia bryophila 376MFSha3.1	0.58	H281DRAFT_05824		tRNA s(2)C-32 sulfurtransferase	0.38	H281DRAFT_00419		transcriptional regulator, LacI family	low	> 103
Hydrogenophaga sp. GW460-11-11-14-LB1	0.56	GFF1658		tRNA(Cytosine32)-2-thiocytidine synthetase	0.23	GFF4377		Galactose operon repressor, GalR-LacI family of transcriptional regulators	low	> 90
Variovorax sp. OAS795	0.56	ABID97_RS06505		tRNA 2-thiocytidine(32) synthetase TtcA	0.21	ABID97_RS03270		LacI family DNA-binding transcriptional regulator	low	> 91
Variovorax sp. SCN45	0.56	GFF7310		tRNA-(cytosine32)-2-thiocytidine synthetase TtcA	0.36	GFF6056		Transcriptional regulator, LacI family	low	> 127
Dinoroseobacter shibae DFL-12	0.46	Dshi_0330		PP-loop domain protein (RefSeq)	0.24	Dshi_2029		transcriptional regulator, LacI family (RefSeq)	low	> 64
Bacteroides thetaiotaomicron VPI-5482	0.20	BT4558		conserved hypothetical protein (NCBI ptt file)	0.19	BT3613		LacI family transcriptional regulator (NCBI ptt file)	low	> 81

Not shown: 55 genomes with orthologs for HSERO_RS22035 only; 6 genomes with orthologs for HSERO_RS02985 only