Conservation of cofitness between HGI48_RS00230 and HGI48_RS13220 in Dickeya dianthicola 67-19

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS00230 urea carboxylase-associated family protein 1.0 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.49 17
Dickeya dianthicola ME23 0.99 DZA65_RS00235 urea carboxylase-associated family protein 1.00 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Dickeya dadantii 3937 0.97 DDA3937_RS21010 urea carboxylase-associated family protein 0.92 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 74
Marinobacter adhaerens HP15 0.71 HP15_3147 urea carboxylase-associated protein 1 0.50 HP15_2221 pseudouridine synthase, RluA family low > 73
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3302 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) 0.52 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas sp. RS175 0.66 PFR28_00670 hypothetical protein 0.55 PFR28_03018 Ribosomal large subunit pseudouridine synthase C low > 88
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS15410 urea carboxylase-associated family protein 0.47 QEN71_RS04500 RluA family pseudouridine synthase low > 153
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS25980 urea carboxylase 0.45 BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C low > 109
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_04665 urea carboxylase 0.56 AO356_20125 23S rRNA pseudouridylate synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2779 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) 0.56 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF5717 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) 0.44 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 90
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_03838 hypothetical protein 0.44 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase low > 103
Paraburkholderia graminis OAS925 0.64 ABIE53_006249 urea carboxylase-associated protein 1 0.45 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase low > 113
Klebsiella michiganensis M5al 0.63 BWI76_RS13980 hypothetical protein 0.83 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase low > 92
Enterobacter sp. TBS_079 0.62 MPMX20_02078 hypothetical protein 0.81 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C low > 85
Pseudomonas stutzeri RCH2 0.62 Psest_2349 urea carboxylase-associated protein 1 0.56 Psest_1680 pseudouridine synthase, RluA family — —
Pantoea sp. MT58 0.62 IAI47_20185 urea carboxylase-associated family protein 0.81 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 76
Pectobacterium carotovorum WPP14 0.62 HER17_RS09200 urea carboxylase-associated family protein 0.88 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Pseudomonas sp. S08-1 0.62 OH686_05920 Urea carboxylase-related aminomethyltransferase 0.55 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase low > 80
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_3976 conserved hypothetical protein 0.55 Psyr_1639 ribosomal large subunit pseudouridine synthase C low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_3976 conserved hypothetical protein 0.55 Psyr_1639 ribosomal large subunit pseudouridine synthase C low > 86
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS22350 urea carboxylase 0.48 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C low > 78
Acinetobacter radioresistens SK82 0.52 MPMX26_00927 hypothetical protein 0.43 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C — —
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01904 urea carboxylase-associated protein 1 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 67
Caulobacter crescentus NA1000 0.49 CCNA_01904 urea carboxylase-associated protein 1 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 66
Rahnella sp. WP5 0.23 EX31_RS07435 urea carboxylase-associated family protein 0.84 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 89
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_3119 Aminomethyltransferase (EC 2.1.2.10) 0.52 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 87
Alteromonas macleodii MIT1002 0.17 MIT1002_02420 urea carboxylase-associated protein 1 0.61 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C low > 70

Not shown: 2 genomes with orthologs for HGI48_RS00230 only; 55 genomes with orthologs for HGI48_RS13220 only