Conservation of cofitness between HER17_RS02810 and HER17_RS21590 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02810 peroxide stress protein YaaA 1.0 HER17_RS21590 transcriptional regulator AsnC 0.85 17
Dickeya dadantii 3937 0.84 DDA3937_RS18400 peroxide stress protein YaaA 0.98 DDA3937_RS00010 transcriptional regulator AsnC low > 74
Escherichia coli ECOR38 0.82 HEPCGN_09095 yaaA peroxide stress protein YaaA 0.88 HEPCGN_13490 asnC transcriptional regulator AsnC low > 87
Dickeya dianthicola ME23 0.82 DZA65_RS19470 peroxide stress protein YaaA 0.98 DZA65_RS22350 transcriptional regulator AsnC low > 75
Escherichia coli Nissle 1917 0.82 ECOLIN_RS00035 peroxide stress protein YaaA 0.88 ECOLIN_RS21525 transcriptional regulator AsnC low > 55
Enterobacter sp. TBS_079 0.82 MPMX20_00714 Peroxide stress resistance protein YaaA 0.91 MPMX20_04624 Regulatory protein AsnC 0.19 43
Escherichia fergusonii Becca 0.82 EFB2_04037 Peroxide stress resistance protein YaaA 0.88 EFB2_04890 Regulatory protein AsnC low > 86
Escherichia coli ECRC102 0.82 NIAGMN_08940 yaaA peroxide stress protein YaaA 0.88 NIAGMN_12530 asnC transcriptional regulator AsnC — —
Escherichia coli ECRC101 0.82 MCAODC_01605 yaaA peroxide stress protein YaaA 0.88 MCAODC_05280 asnC transcriptional regulator AsnC low > 87
Escherichia coli ECRC99 0.82 KEDOAH_17065 yaaA peroxide stress protein YaaA 0.88 KEDOAH_13375 asnC transcriptional regulator AsnC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_03654 hypothetical protein 0.88 OHPLBJKB_04310 Regulatory protein AsnC low > 73
Escherichia coli ECRC100 0.82 OKFHMN_11090 yaaA peroxide stress protein YaaA 0.88 OKFHMN_14775 asnC transcriptional regulator AsnC low > 80
Escherichia coli BL21 0.82 ECD_00006 peroxide resistance protein, lowers intracellular iron 0.88 ECD_03627 transcriptional activator of asnA; autorepressor low > 61
Escherichia coli ECRC98 0.82 JDDGAC_14685 yaaA peroxide stress protein YaaA 0.88 JDDGAC_18395 asnC transcriptional regulator AsnC low > 86
Dickeya dianthicola 67-19 0.82 HGI48_RS18330 peroxide stress protein YaaA 0.97 HGI48_RS21370 transcriptional regulator AsnC low > 71
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria 0.89 EX28DRAFT_4019 Transcriptional regulators low > 76
Escherichia coli ECRC62 0.81 BNILDI_08185 yaaA peroxide stress protein YaaA 0.88 BNILDI_04615 asnC transcriptional regulator AsnC low > 75
Escherichia coli BW25113 0.81 b0006 yaaA hypothetical protein (NCBI) 0.88 b3743 asnC DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECOR27 0.81 NOLOHH_03420 yaaA peroxide stress protein YaaA 0.88 NOLOHH_06910 asnC transcriptional regulator AsnC low > 75
Serratia liquefaciens MT49 0.80 IAI46_03045 peroxide stress protein YaaA 0.92 IAI46_25100 transcriptional regulator AsnC low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS04260 peroxide stress protein YaaA 0.89 BWI76_RS00245 transcriptional regulator AsnC low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1081 UPF0246 protein YaaA 0.87 GFF1714 Regulatory protein AsnC low > 78
Pantoea sp. MT58 0.79 IAI47_16200 peroxide stress protein YaaA 0.89 IAI47_00310 transcriptional regulator AsnC low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS02625 yaaA peroxide stress protein YaaA 0.87 LU632_RS24700 asnC transcriptional regulator AsnC low > 74
Rahnella sp. WP5 0.76 EX31_RS03930 peroxide stress protein YaaA 0.89 EX31_RS06150 transcriptional regulator AsnC low > 89
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11930 peroxide stress protein YaaA 0.77 CSW01_00385 transcriptional regulator AsnC low > 62
Pseudomonas putida KT2440 0.67 PP_1289 conserved protein of unknown function, DUF328 family 0.22 PP_3532 Transcriptional regulator, AsnC family low > 96
Shewanella loihica PV-4 0.64 Shew_1093 hypothetical protein (RefSeq) 0.81 Shew_0782 DNA-binding transcriptional regulator AsnC (RefSeq) low > 60
Shewanella amazonensis SB2B 0.63 Sama_0917 hypothetical protein (RefSeq) 0.81 Sama_0605 DNA-binding transcriptional regulator AsnC (RefSeq) low > 62
Shewanella sp. ANA-3 0.58 Shewana3_3143 hypothetical protein (RefSeq) 0.81 Shewana3_0798 DNA-binding transcriptional regulator AsnC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.57 SO3540 conserved hypothetical protein (NCBI ptt file) 0.81 SO3799 asnC regulatory protein AsnC (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS05780 hypothetical protein 0.24 RR42_RS03950 AsnC family transcriptional regulator — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_0335 Uncharacterized protein conserved in bacteria 0.47 Echvi_3066 Transcriptional regulators — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS01170 peroxide stress protein YaaA 0.19 ABCV34_RS02305 Lrp/AsnC family transcriptional regulator low > 48
Bacteroides thetaiotaomicron VPI-5482 0.31 BT3869 conserved hypothetical protein (NCBI ptt file) 0.37 BT2978 transcriptional regulator (NCBI ptt file) — —
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS09820 peroxide stress protein YaaA 0.38 HMPREF1078_RS11155 Lrp/AsnC ligand binding domain-containing protein low > 61
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS02240 peroxide stress protein YaaA 0.38 ABI39_RS04730 Lrp/AsnC ligand binding domain-containing protein low > 72
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS02925 peroxide stress protein YaaA 0.38 HMPREF1058_RS12070 Lrp/AsnC ligand binding domain-containing protein low > 67
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS06535 peroxide stress protein YaaA 0.39 HMPREF1181_RS01345 Lrp/AsnC ligand binding domain-containing protein low > 56

Not shown: 36 genomes with orthologs for HER17_RS02810 only; 6 genomes with orthologs for HER17_RS21590 only