Conservation of cofitness between HER17_RS14220 and HER17_RS21440 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14220 dicarboxylate/amino acid:cation symporter 1.0 HER17_RS21440 nitrogen regulation protein NR(I) 0.66 18
Dickeya dadantii 3937 0.83 DDA3937_RS07395 dicarboxylate/amino acid:cation symporter 0.97 DDA3937_RS00125 nitrogen regulation protein NR(I) low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS07260 dicarboxylate/amino acid:cation symporter 0.97 HGI48_RS21235 nitrogen regulation protein NR(I) low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS07770 dicarboxylate/amino acid:cation symporter 0.97 DZA65_RS22210 nitrogen regulation protein NR(I) low > 75
Ralstonia solanacearum PSI07 0.64 RPSI07_RS14855 dicarboxylate/amino acid:cation symporter 0.57 RPSI07_RS17815 nitrogen regulation protein NR(I) low > 81
Ralstonia solanacearum GMI1000 0.64 RS_RS09840 dicarboxylate/amino acid:cation symporter 0.57 RS_RS06320 nitrogen regulation protein NR(I) — —
Ralstonia solanacearum UW163 0.63 UW163_RS11255 dicarboxylate/amino acid:cation symporter 0.57 UW163_RS13000 nitrogen regulation protein NR(I) — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS02470 dicarboxylate/amino acid:cation symporter 0.57 RALBFv3_RS15540 nitrogen regulation protein NR(I) — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2249 Proton/glutamate symport protein @ Sodium/glutamate symport protein 0.67 Pf6N2E2_3826 Nitrogen regulation protein NR(I) low > 103
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_01905 L-aspartate transporter (from data) 0.67 AO356_09730 nitrogen regulation protein NR(I) low > 104
Pseudomonas simiae WCS417 0.61 PS417_19045 amino acid:proton symporter 0.67 PS417_01635 nitrogen regulation protein NR(I) low > 88
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14385 dicarboxylate/amino acid:cation symporter 0.57 ABZR87_RS11070 nitrogen regulation protein NR(I) low > 80
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS26130 C4-dicarboxylate ABC transporter 0.57 RR42_RS12980 chemotaxis protein CheY low > 128
Azospirillum sp. SherDot2 0.55 MPMX19_03595 C4-dicarboxylate transport protein 2 0.40 MPMX19_01112 DNA-binding transcriptional regulator NtrC — —
Dechlorosoma suillum PS 0.54 Dsui_3482 Na+/H+ dicarboxylate symporter 0.57 Dsui_1051 nitrogen regulation protein NR(I) low > 51
Variovorax sp. SCN45 0.53 GFF5354 C4-dicarboxylate transport protein 0.55 GFF3066 Nitrogen regulation protein NR(I), GlnG (=NtrC) — —
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_00264 C4-dicarboxylate transport protein 0.35 CCNA_03424 AAA-family response regulator tacA low > 67
Caulobacter crescentus NA1000 0.51 CCNA_00264 C4-dicarboxylate transport protein 0.35 CCNA_03424 AAA-family response regulator tacA low > 66
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_5607 C4-dicarboxylate transport protein 0.67 Pf1N1B4_1611 Nitrogen regulation protein NR(I) low > 87
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33330 C4-dicarboxylate ABC transporter 0.55 BPHYT_RS12935 chemotaxis protein CheY low > 109
Variovorax sp. OAS795 0.50 ABID97_RS23115 dicarboxylate/amino acid:cation symporter 0.55 ABID97_RS09945 nitrogen regulation protein NR(I) low > 91
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_0201 Na+/H+-dicarboxylate symporters 0.38 Ga0059261_0137 nitrogen regulation protein NR(I) low > 68
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS19090 C4-dicarboxylate ABC transporter 0.57 HSERO_RS15680 chemotaxis protein CheY low > 78
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS33810 dicarboxylate/amino acid:cation symporter 0.56 QEN71_RS05675 nitrogen regulation protein NR(I) low > 153
Enterobacter sp. TBS_079 0.48 MPMX20_02796 C4-dicarboxylate transport protein 0.92 MPMX20_04597 DNA-binding transcriptional regulator NtrC low > 85
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS10595 dicarboxylate/amino acid:cation symporter 0.32 CA265_RS01040 sigma-54-dependent Fis family transcriptional regulator low > 88
Klebsiella michiganensis M5al 0.47 BWI76_RS19175 dicarboxylate/amino acid:cation symporter 0.91 BWI76_RS00385 nitrogen assimilation regulatory protein low > 92
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0664 Na+/H+-dicarboxylate symporters 0.92 EX28DRAFT_4350 nitrogen regulation protein NR(I) low > 76
Escherichia coli ECOR38 0.42 HEPCGN_01380 gltP dicarboxylate/amino acid:cation symporter 0.92 HEPCGN_12740 glnG nitrogen regulation protein NR(I) low > 87
Escherichia coli ECRC102 0.42 NIAGMN_04940 gltP dicarboxylate/amino acid:cation symporter 0.92 NIAGMN_11865 glnG nitrogen regulation protein NR(I) — —
Escherichia coli ECRC98 0.42 JDDGAC_10545 gltP dicarboxylate/amino acid:cation symporter 0.92 JDDGAC_17735 glnG nitrogen regulation protein NR(I) — —
Escherichia coli ECRC100 0.42 OKFHMN_06890 gltP dicarboxylate/amino acid:cation symporter 0.92 OKFHMN_14110 glnG nitrogen regulation protein NR(I) low > 80
Escherichia coli ECRC101 0.42 MCAODC_26110 gltP dicarboxylate/amino acid:cation symporter 0.92 MCAODC_04610 glnG nitrogen regulation protein NR(I) low > 87
Escherichia coli ECRC99 0.42 KEDOAH_21075 gltP dicarboxylate/amino acid:cation symporter 0.92 KEDOAH_14040 glnG nitrogen regulation protein NR(I) — —

Not shown: 1 genomes with orthologs for HER17_RS14220 only; 62 genomes with orthologs for HER17_RS21440 only