Conservation of cofitness between HER17_RS20780 and HER17_RS20770 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20780 lipopolysaccharide heptosyltransferase RfaC 1.0 HER17_RS20770 ADP-glyceromanno-heptose 6-epimerase 0.94 2
Dickeya dianthicola ME23 0.78 DZA65_RS00815 lipopolysaccharide heptosyltransferase RfaC 0.91 DZA65_RS00825 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dadantii 3937 0.77 DDA3937_RS20450 lipopolysaccharide heptosyltransferase RfaC 0.92 DDA3937_RS20440 ADP-glyceromanno-heptose 6-epimerase — —
Rahnella sp. WP5 0.77 EX31_RS14405 lipopolysaccharide heptosyltransferase RfaC 0.91 EX31_RS14395 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dianthicola 67-19 0.77 HGI48_RS00760 lipopolysaccharide heptosyltransferase RfaC 0.91 HGI48_RS00770 ADP-glyceromanno-heptose 6-epimerase — —
Serratia liquefaciens MT49 0.77 IAI46_24745 lipopolysaccharide heptosyltransferase RfaC 0.90 IAI46_24735 ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECOR27 0.73 NOLOHH_07570 rfaC lipopolysaccharide heptosyltransferase RfaC 0.86 NOLOHH_07580 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Pantoea sp. MT58 0.73 IAI47_00680 lipopolysaccharide heptosyltransferase RfaC 0.85 IAI47_00690 ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BW25113 0.72 b3621 rfaC ADP-heptose:LPS heptosyl transferase I (NCBI) 0.86 b3619 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) 0.95 2
Escherichia coli ECRC101 0.72 MCAODC_06200 rfaC lipopolysaccharide heptosyltransferase RfaC 0.86 MCAODC_06210 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC98 0.72 JDDGAC_19315 rfaC lipopolysaccharide heptosyltransferase RfaC 0.86 JDDGAC_19325 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC102 0.72 NIAGMN_13450 rfaC lipopolysaccharide heptosyltransferase RfaC 0.86 NIAGMN_13460 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC99 0.72 KEDOAH_12460 rfaC lipopolysaccharide heptosyltransferase RfaC 0.86 KEDOAH_12450 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC100 0.72 OKFHMN_15690 rfaC lipopolysaccharide heptosyltransferase RfaC 0.86 OKFHMN_15700 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Enterobacter sp. TBS_079 0.72 MPMX20_00112 Lipopolysaccharide heptosyltransferase 1 0.87 MPMX20_00114 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia fergusonii Becca 0.72 EFB2_00190 Lipopolysaccharide heptosyltransferase 1 0.87 EFB2_00192 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS20655 lipopolysaccharide heptosyltransferase RfaC 0.87 ECOLIN_RS20645 ADP-glyceromanno-heptose 6-epimerase 0.92 2
Escherichia coli BL21 0.71 ECD_03478 ADP-heptose:LPS heptosyl transferase I 0.86 ECD_03476 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00079 Lipopolysaccharide heptosyltransferase 1 0.87 OHPLBJKB_00081 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli ECOR38 0.71 HEPCGN_14535 rfaC lipopolysaccharide heptosyltransferase RfaC 0.87 HEPCGN_14545 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3873 lipopolysaccharide heptosyltransferase I 0.87 EX28DRAFT_3871 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli ECRC62 0.71 BNILDI_03940 rfaC lipopolysaccharide heptosyltransferase RfaC 0.86 BNILDI_03930 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF390 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.86 GFF392 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) 0.96 2
Erwinia tracheiphila SCR3 0.70 LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC 0.87 LU632_RS21915 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Klebsiella michiganensis M5al 0.68 BWI76_RS27270 ADP-heptose--LPS heptosyl transferase I 0.88 BWI76_RS27260 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_020670 lipopolysaccharide heptosyltransferase I 0.35 TX73_020650 ADP-glyceromanno-heptose 6-epimerase — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS13305 lipopolysaccharide heptosyltransferase I 0.49 ABCV34_RS07065 ADP-glyceromanno-heptose 6-epimerase — —
Dechlorosoma suillum PS 0.32 Dsui_0403 lipopolysaccharide heptosyltransferase I 0.57 Dsui_1953 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS04475 glycosyl transferase family 1 0.54 BPHYT_RS14855 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Paraburkholderia graminis OAS925 0.30 ABIE53_001190 heptosyltransferase-1 0.54 ABIE53_003146 ADP-L-glycero-D-manno-heptose 6-epimerase — —
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_00079 heptosyltransferase-1 0.55 H281DRAFT_03913 ADP-glyceromanno-heptose 6-epimerase precursor — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS20560 lipopolysaccharide heptosyltransferase I 0.52 RPSI07_RS19655 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum GMI1000 0.29 RS_RS03480 lipopolysaccharide heptosyltransferase I 0.53 RS_RS04550 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Ralstonia solanacearum UW163 0.29 UW163_RS00865 lipopolysaccharide heptosyltransferase I 0.53 UW163_RS15995 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS12700 lipopolysaccharide heptosyltransferase I 0.53 RALBFv3_RS13815 ADP-glyceromanno-heptose 6-epimerase 0.87 2
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS08750 lipopolysaccharide heptosyltransferase I 0.53 ABZR87_RS09505 ADP-glyceromanno-heptose 6-epimerase 0.88 5
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS15685 ADP-heptose--LPS heptosyltransferase 0.51 RR42_RS04520 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS25410 lipopolysaccharide heptosyltransferase I 0.53 QEN71_RS04125 ADP-glyceromanno-heptose 6-epimerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.10 CA264_20500 glycosyl transferase 0.31 CA264_01380 ADP-L-glycero-D-mannoheptose-6-epimerase — —

Not shown: 17 genomes with orthologs for HER17_RS20780 only; 13 genomes with orthologs for HER17_RS20770 only