Conservation of cofitness between HER17_RS01965 and HER17_RS19525 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01965 peptidylprolyl isomerase 1.0 HER17_RS19525 anaerobic ribonucleoside-triphosphate reductase 0.83 6
Dickeya dianthicola ME23 0.72 DZA65_RS20605 peptidylprolyl isomerase 0.92 DZA65_RS01880 anaerobic ribonucleoside-triphosphate reductase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3723 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.88 GFF919 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) low > 78
Dickeya dianthicola 67-19 0.71 HGI48_RS19515 peptidylprolyl isomerase 0.92 HGI48_RS01825 anaerobic ribonucleoside-triphosphate reductase low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS19395 peptidylprolyl isomerase 0.92 DDA3937_RS01875 anaerobic ribonucleoside-triphosphate reductase low > 74
Escherichia coli BL21 0.71 ECD_03200 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 0.87 ECD_04106 anaerobic ribonucleoside-triphosphate reductase low > 61
Escherichia coli ECOR27 0.71 NOLOHH_09085 slyD peptidylprolyl isomerase 0.87 NOLOHH_04170 nrdD anaerobic ribonucleoside-triphosphate reductase low > 75
Pantoea sp. MT58 0.71 IAI47_02040 peptidylprolyl isomerase 0.80 IAI47_16925 anaerobic ribonucleoside-triphosphate reductase low > 76
Escherichia coli ECRC62 0.71 BNILDI_02435 slyD peptidylprolyl isomerase 0.87 BNILDI_07340 nrdD anaerobic ribonucleoside-triphosphate reductase low > 75
Escherichia coli ECOR38 0.71 HEPCGN_16115 slyD peptidylprolyl isomerase 0.87 HEPCGN_10100 nrdD anaerobic ribonucleoside-triphosphate reductase low > 87
Escherichia coli Nissle 1917 0.71 ECOLIN_RS19180 peptidylprolyl isomerase 0.87 ECOLIN_RS24585 anaerobic ribonucleoside-triphosphate reductase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00354 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.87 OHPLBJKB_03797 Anaerobic ribonucleoside-triphosphate reductase low > 73
Escherichia coli ECRC100 0.71 OKFHMN_17285 slyD peptidylprolyl isomerase 0.87 OKFHMN_11905 nrdD anaerobic ribonucleoside-triphosphate reductase low > 80
Escherichia coli ECRC102 0.71 NIAGMN_15055 slyD peptidylprolyl isomerase 0.87 NIAGMN_09755 nrdD anaerobic ribonucleoside-triphosphate reductase — —
Escherichia coli BW25113 0.71 b3349 slyD FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) 0.87 b4238 nrdD anaerobic ribonucleoside triphosphate reductase (NCBI) low > 76
Escherichia coli ECRC99 0.71 KEDOAH_10855 slyD peptidylprolyl isomerase 0.87 KEDOAH_16250 nrdD anaerobic ribonucleoside-triphosphate reductase — —
Escherichia coli ECRC98 0.71 JDDGAC_20915 slyD peptidylprolyl isomerase 0.87 JDDGAC_15545 nrdD anaerobic ribonucleoside-triphosphate reductase low > 86
Escherichia coli ECRC101 0.71 MCAODC_07815 slyD peptidylprolyl isomerase 0.87 MCAODC_02410 nrdD anaerobic ribonucleoside-triphosphate reductase low > 87
Escherichia fergusonii Becca 0.71 EFB2_00474 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.87 EFB2_04295 Anaerobic ribonucleoside-triphosphate reductase low > 86
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4181 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.88 EX28DRAFT_3437 ribonucleoside-triphosphate reductase class III catalytic subunit (EC 1.17.4.2) low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_04242 hypothetical protein 0.88 MPMX20_00531 Anaerobic ribonucleoside-triphosphate reductase low > 85
Klebsiella michiganensis M5al 0.68 BWI76_RS25920 peptidylprolyl isomerase 0.87 BWI76_RS02935 anaerobic ribonucleoside triphosphate reductase low > 92
Erwinia tracheiphila SCR3 0.65 LU632_RS22725 slyD peptidylprolyl isomerase 0.82 LU632_RS20975 nrdD anaerobic ribonucleoside-triphosphate reductase low > 74
Shewanella amazonensis SB2B 0.36 Sama_0904 peptidyl-prolyl cis-trans isomerase SlyD (RefSeq) 0.77 Sama_1275 anaerobic ribonucleoside triphosphate reductase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0074 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.07 B158DRAFT_1727 ribonucleoside-triphosphate reductase class III catalytic subunit (EC 1.17.4.2) low > 40
Shewanella loihica PV-4 0.35 Shew_1078 peptidylprolyl isomerase, FKBP-type (RefSeq) 0.79 Shew_2449 anaerobic ribonucleoside triphosphate reductase (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.34 Psest_3212 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.08 Psest_0840 anaerobic ribonucleoside-triphosphate reductase low > 67
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5262 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.08 Pf6N2E2_735 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) low > 103
Pseudomonas sp. RS175 0.33 PFR28_00197 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.09 PFR28_01638 Anaerobic ribonucleoside-triphosphate reductase low > 88
Pseudomonas simiae WCS417 0.33 PS417_03740 peptidylprolyl isomerase 0.08 PS417_15690 ribonucleoside-triphosphate reductase low > 88
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_16690 peptidylprolyl isomerase 0.08 AO356_25235 anaerobic ribonucleoside-triphosphate reductase low > 104
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_05055 peptidylprolyl isomerase 0.08 AO353_22125 anaerobic ribonucleoside-triphosphate reductase low > 101
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1052 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.08 Pf1N1B4_5729 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) 0.24 55
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18450 peptidylprolyl isomerase 0.09 RPSI07_RS06720 ribonucleoside triphosphate reductase low > 81
Ralstonia solanacearum GMI1000 0.30 RS_RS05725 peptidylprolyl isomerase 0.08 RS_RS21760 ribonucleoside triphosphate reductase low > 80
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14910 peptidylprolyl isomerase 0.09 RALBFv3_RS16725 ribonucleoside triphosphate reductase low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS12380 peptidylprolyl isomerase 0.09 UW163_RS18080 ribonucleoside triphosphate reductase — —
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS16705 FKBP-type peptidyl-prolyl cis-trans isomerase 0.18 HMPREF1078_RS12530 anaerobic ribonucleoside triphosphate reductase low > 61
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1303 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.08 Ac3H11_3312 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) low > 79

Not shown: 24 genomes with orthologs for HER17_RS01965 only; 15 genomes with orthologs for HER17_RS19525 only