Conservation of cofitness between HER17_RS11620 and HER17_RS17200 in Pectobacterium carotovorum WPP14

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11620 NUDIX hydrolase 1.0 HER17_RS17200 efflux RND transporter periplasmic adaptor subunit 0.78 14
Escherichia coli BL21 0.78 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.31 ECD_00883 macrolide transporter membrane fusion protein (MFP) component — —
Escherichia coli Nissle 1917 0.78 ECOLIN_RS06630 phosphatase NudJ 0.31 ECOLIN_RS04675 macrolide transporter subunit MacA — —
Escherichia fergusonii Becca 0.78 EFB2_02841 Phosphatase NudJ 0.31 EFB2_03183 Macrolide export protein MacA 0.28 65
Escherichia coli ECRC101 0.78 MCAODC_22335 nudJ phosphatase NudJ 0.31 MCAODC_25025 macA macrolide transporter subunit MacA low > 87
Escherichia coli ECRC98 0.78 JDDGAC_06615 nudJ phosphatase NudJ 0.31 JDDGAC_09445 macA macrolide transporter subunit MacA low > 86
Escherichia coli BW25113 0.78 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.31 b0878 b0878 putative membrane protein (VIMSS) low > 76
Escherichia coli ECRC62 0.78 BNILDI_19060 nudJ phosphatase NudJ 0.31 BNILDI_20460 macA macrolide transporter subunit MacA low > 75
Escherichia coli ECOR38 0.78 HEPCGN_24225 nudJ phosphatase NudJ 0.31 HEPCGN_22875 macA macrolide transporter subunit MacA low > 87
Escherichia coli ECRC100 0.78 OKFHMN_00750 nudJ phosphatase NudJ 0.31 OKFHMN_05810 macA macrolide transporter subunit MacA low > 80
Escherichia coli ECOR27 0.78 NOLOHH_20895 nudJ phosphatase NudJ 0.31 NOLOHH_22205 macA macrolide transporter subunit MacA low > 75
Escherichia coli ECRC102 0.78 NIAGMN_24895 nudJ phosphatase NudJ 0.31 NIAGMN_03850 macA macrolide transporter subunit MacA — —
Escherichia coli ECRC99 0.78 KEDOAH_24835 nudJ phosphatase NudJ 0.31 KEDOAH_22100 macA macrolide transporter subunit MacA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_02534 Phosphatase NudJ 0.31 OHPLBJKB_02790 Macrolide export protein MacA low > 73
Dickeya dadantii 3937 0.77 DDA3937_RS11480 NUDIX hydrolase 0.59 DDA3937_RS04450 efflux RND transporter periplasmic adaptor subunit low > 74
Serratia liquefaciens MT49 0.77 IAI46_10445 NUDIX hydrolase 0.58 IAI46_18480 efflux RND transporter periplasmic adaptor subunit low > 86
Dickeya dianthicola ME23 0.76 DZA65_RS11860 NUDIX hydrolase 0.56 DZA65_RS04325 efflux RND transporter periplasmic adaptor subunit low > 75
Klebsiella michiganensis M5al 0.75 BWI76_RS11320 NUDIX hydrolase 0.32 BWI76_RS22535 membrane fusion protein of a type I secretion system — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.29 GFF4905 Macrolide-specific efflux protein MacA low > 78
Enterobacter sp. TBS_079 0.71 MPMX20_01818 Phosphatase NudJ 0.31 MPMX20_01540 Macrolide export protein MacA low > 85
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.30 EX28DRAFT_2054 RND family efflux transporter, MFP subunit low > 76
Shewanella sp. ANA-3 0.40 Shewana3_1748 NUDIX hydrolase (RefSeq) 0.40 Shewana3_3456 RND family efflux transporter MFP subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2631 MutT/nudix family protein (NCBI ptt file) 0.40 SO0820 HlyD family secretion protein (NCBI ptt file) low > 76
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00430 NUDIX hydrolase 0.11 LRK54_RS11930 efflux RND transporter periplasmic adaptor subunit low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00170 NUDIX hydrolase 0.11 LRK55_RS11655 efflux RND transporter periplasmic adaptor subunit low > 63
Marinobacter adhaerens HP15 0.32 HP15_2085 MutT/nudix family protein 0.13 HP15_3261 efflux transporter, RND family, MFP subunit low > 73
Acinetobacter radioresistens SK82 0.32 MPMX26_01049 Phosphatase NudJ 0.35 MPMX26_00467 Macrolide export protein MacA low > 36
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_1838 ADP-ribose pyrophosphatase 0.09 B158DRAFT_0948 RND family efflux transporter, MFP subunit low > 40
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2640 Nudix-like NDP and NTP phosphohydrolase YmfB 0.29 PfGW456L13_2393 pyoverdine-specific efflux macA-like protein low > 87
Pseudomonas sp. RS175 0.29 PFR28_02618 Phosphatase NudJ 0.36 PFR28_02258 Macrolide export protein MacA — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_287 Nudix-like NDP and NTP phosphohydrolase YmfB 0.30 Pf6N2E2_20 pyoverdine-specific efflux macA-like protein low > 103
Pseudomonas fluorescens SBW25 0.28 PFLU_RS18575 NUDIX hydrolase 0.35 PFLU_RS12495 macrolide transporter subunit MacA low > 109
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_4049 Nudix-like NDP and NTP phosphohydrolase YmfB 0.31 Pf1N1B4_134 pyoverdine-specific efflux macA-like protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS18575 NUDIX hydrolase 0.35 PFLU_RS12495 macrolide transporter subunit MacA low > 109
Variovorax sp. SCN45 0.27 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ 0.38 GFF1292 Macrolide-specific efflux protein MacA low > 127
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_22115 NUDIX hydrolase 0.36 AO356_28205 hemolysin secretion protein D low > 104
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS26735 NUDIX hydrolase 0.38 QEN71_RS35170 macrolide transporter subunit MacA low > 153
Pseudomonas simiae WCS417 0.26 PS417_16535 NUDIX hydrolase 0.31 PS417_17635 hemolysin secretion protein D low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3189 NUDIX hydrolase 0.37 Psyr_2617 Secretion protein HlyD low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3189 NUDIX hydrolase 0.37 Psyr_2617 Secretion protein HlyD low > 86
Pseudomonas putida KT2440 0.25 PP_4013 MutT/nudix family protein 0.31 PP_4209 ABC export system, membrane fusion protein low > 96
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS03475 NUDIX hydrolase 0.44 HSERO_RS10245 hemolysin secretion protein D low > 78
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS17470 NUDIX hydrolase 0.35 RR42_RS26395 hemolysin secretion protein D low > 128

Not shown: 25 genomes with orthologs for HER17_RS11620 only; 22 genomes with orthologs for HER17_RS17200 only