Conservation of cofitness between HER17_RS00495 and HER17_RS08925 in Pectobacterium carotovorum WPP14

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein 1.0 HER17_RS08925 Fe-S cluster assembly protein SufB 0.94 18
Dickeya dadantii 3937 0.91 DDA3937_RS00660 branched-chain amino acid ABC transporter substrate-binding protein 0.90 DDA3937_RS12775 Fe-S cluster assembly protein SufB low > 74
Rahnella sp. WP5 0.88 EX31_RS14805 branched-chain amino acid ABC transporter substrate-binding protein 0.86 EX31_RS13905 Fe-S cluster assembly protein SufB — —
Dickeya dianthicola 67-19 0.88 HGI48_RS20730 high-affinity branched-chain amino acid ABC transporter substrate-binding protein 0.89 HGI48_RS12840 Fe-S cluster assembly protein SufB low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS21740 branched-chain amino acid ABC transporter substrate-binding protein 0.89 DZA65_RS13305 Fe-S cluster assembly protein SufB low > 75
Serratia liquefaciens MT49 0.87 IAI46_00960 branched-chain amino acid ABC transporter substrate-binding protein 0.86 IAI46_11150 Fe-S cluster assembly protein SufB low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS19255 branched-chain amino acid ABC transporter substrate-binding protein 0.86 LU632_RS11060 sufB Fe-S cluster assembly protein SufB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_00245 Leucine-specific-binding protein 0.85 OHPLBJKB_02041 FeS cluster assembly protein SufB low > 73
Escherichia coli ECRC62 0.79 BNILDI_02970 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 BNILDI_16565 sufB Fe-S cluster assembly protein SufB low > 75
Escherichia coli ECRC99 0.79 KEDOAH_11400 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 KEDOAH_00855 sufB Fe-S cluster assembly protein SufB — —
Escherichia coli ECRC100 0.79 OKFHMN_16740 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 OKFHMN_27255 sufB Fe-S cluster assembly protein SufB low > 80
Escherichia coli BW25113 0.79 b3458 livK leucine transporter subunit (NCBI) 0.85 b1683 ynhE orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC101 0.79 MCAODC_07270 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 MCAODC_18155 sufB Fe-S cluster assembly protein SufB low > 87
Escherichia coli ECRC102 0.79 NIAGMN_14510 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 NIAGMN_00810 sufB Fe-S cluster assembly protein SufB — —
Escherichia coli ECOR27 0.79 NOLOHH_08535 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 NOLOHH_17775 sufB Fe-S cluster assembly protein SufB low > 75
Escherichia coli ECRC98 0.79 JDDGAC_20370 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 JDDGAC_01830 sufB Fe-S cluster assembly protein SufB low > 86
Escherichia fergusonii Becca 0.79 EFB2_00364 Leucine-specific-binding protein 0.85 EFB2_02309 FeS cluster assembly protein SufB low > 86
Escherichia coli ECOR38 0.79 HEPCGN_15560 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 HEPCGN_05640 sufB Fe-S cluster assembly protein SufB low > 87
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4290 ABC-type branched-chain amino acid transport systems, periplasmic component 0.84 EX28DRAFT_1686 FeS assembly protein SufB low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS19775 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.85 ECOLIN_RS09410 Fe-S cluster assembly protein SufB low > 55
Enterobacter sp. TBS_079 0.78 MPMX20_04334 Leucine-specific-binding protein 0.84 MPMX20_01944 FeS cluster assembly protein SufB low > 85
Pantoea sp. MT58 0.78 IAI47_01565 branched-chain amino acid ABC transporter substrate-binding protein 0.89 IAI47_10875 Fe-S cluster assembly protein SufB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF545 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.84 GFF3559 Iron-sulfur cluster assembly protein SufB low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS26350 branched chain amino acid ABC transporter substrate-binding protein 0.84 BWI76_RS16995 Fe-S cluster assembly protein SufB low > 92
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_17125 leucine ABC transporter substrate-binding protein 0.61 AO353_24920 cysteine desulfurase low > 101
Marinobacter adhaerens HP15 0.58 HP15_3055 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein 0.62 HP15_2984 cysteine desulfurase activator complex subunit SufB — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS03585 branched-chain amino acid ABC transporter substrate-binding protein 0.62 ABCV34_RS04695 Fe-S cluster assembly protein SufB — —
Azospirillum sp. SherDot2 0.38 MPMX19_04840 Leu/Ile/Val-binding protein 0.62 MPMX19_04830 FeS cluster assembly protein SufB — —
Rhodospirillum rubrum S1H 0.38 Rru_A1746 Extracellular ligand-binding receptor (NCBI) 0.62 Rru_A2573 FeS assembly protein SufB (NCBI) — —
Sinorhizobium meliloti 1021 0.37 SMc00078 Leu/Ile/Val-binding protein 0.61 SMc00530 cysteine desulfurase activator complex subunit SufB — —
Rhodopseudomonas palustris CGA009 0.37 TX73_019730 branched-chain amino acid ABC transporter substrate-binding protein 0.59 TX73_012740 Fe-S cluster assembly protein SufB — —
Rhizobium sp. OAE497 0.35 ABIE40_RS14690 branched-chain amino acid ABC transporter substrate-binding protein 0.60 ABIE40_RS10005 Fe-S cluster assembly protein SufB — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS08260 L-proline and D-alanine ABC transporter, substrate-binding component (from data) 0.62 AZOBR_RS14830 cysteine desulfarase — —
Agrobacterium fabrum C58 0.33 Atu2422 ABC transporter, substrate binding protein (amino acid) 0.60 Atu1824 ABC transporter subunit — —
Bifidobacterium breve UCC2003 0.14 BBR_RS18075 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein 0.36 BBR_RS15105 Fe-S cluster assembly protein SufB — —
Dinoroseobacter shibae DFL-12 0.12 Dshi_1522 Extracellular ligand-binding receptor (RefSeq) 0.60 Dshi_1631 FeS assembly protein SufB (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.10 PGA1_c15890 extracellular ligand-binding receptor 0.60 PGA1_c15370 protein SufB — —

Not shown: 33 genomes with orthologs for HER17_RS00495 only; 20 genomes with orthologs for HER17_RS08925 only