Conservation of cofitness between HER17_RS16015 and HER17_RS08185 in Pectobacterium carotovorum WPP14

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16015 proline-specific permease ProY 1.0 HER17_RS08185 flagellar basal body rod protein FlgF 0.66 15
Dickeya dianthicola ME23 0.88 DZA65_RS05835 proline-specific permease ProY 0.77 DZA65_RS13990 flagellar basal body rod protein FlgF low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS05510 proline-specific permease ProY 0.77 HGI48_RS13505 flagellar basal body rod protein FlgF low > 71
Rahnella sp. WP5 0.85 EX31_RS22070 proline-specific permease ProY 0.66 EX31_RS11295 flagellar basal body rod protein FlgF low > 89
Pantoea sp. MT58 0.83 IAI47_14830 proline-specific permease ProY 0.72 IAI47_12145 flagellar basal body rod protein FlgF low > 76
Serratia liquefaciens MT49 0.83 IAI46_04800 proline-specific permease ProY 0.75 IAI46_15940 flagellar basal body rod protein FlgF low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS05450 proline-specific permease ProY 0.78 DDA3937_RS13460 flagellar basal body rod protein FlgF low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4300 Proline-specific permease proY 0.72 GFF3358 Flagellar basal-body rod protein FlgF low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.72 EX28DRAFT_1855 flagellar hook-basal body protein low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_00989 Proline-specific permease ProY 0.72 MPMX20_01756 Flagellar basal-body rod protein FlgF low > 85
Escherichia coli ECOR38 0.78 HEPCGN_07170 proY proline-specific permease ProY 0.72 HEPCGN_23835 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli ECRC100 0.78 OKFHMN_08530 proY proline-specific permease ProY 0.72 OKFHMN_03655 flgF flagellar basal-body rod protein FlgF low > 80
Escherichia coli ECOR27 0.78 NOLOHH_01460 proY proline-specific permease ProY 0.72 NOLOHH_21185 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli ECRC101 0.78 MCAODC_27755 proY proline-specific permease ProY 0.72 MCAODC_23015 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli BW25113 0.78 b0402 proY predicted cryptic proline transporter (NCBI) 0.72 b1077 flgF flagellar component of cell-proximal portion of basal-body rod (NCBI) low > 76
Escherichia coli ECRC99 0.78 KEDOAH_19435 proY proline-specific permease ProY 0.72 KEDOAH_24100 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC102 0.78 NIAGMN_06585 proY proline-specific permease ProY 0.72 NIAGMN_24175 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC62 0.78 BNILDI_22875 proY proline-specific permease ProY 0.72 BNILDI_19345 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli ECRC98 0.78 JDDGAC_12185 proY proline-specific permease ProY 0.72 JDDGAC_07315 flgF flagellar basal-body rod protein FlgF low > 86
Escherichia fergusonii Becca 0.78 EFB2_03655 Proline-specific permease ProY 0.72 EFB2_02897 Flagellar basal-body rod protein FlgF low > 86
Escherichia coli BL21 0.78 ECD_00350 proline-specific permease 0.72 ECD_01073 flagellar component of cell-proximal portion of basal-body rod — —
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02425 proline-specific permease ProY 0.72 ECOLIN_RS06235 flagellar basal-body rod protein FlgF low > 55
Erwinia tracheiphila SCR3 0.72 LU632_RS18885 proY proline-specific permease ProY 0.78 LU632_RS10415 flagellar basal body rod protein FlgF low > 74
Pseudomonas simiae WCS417 0.64 PS417_01755 proline-specific permease 0.35 PS417_19890 flagellar basal body rod protein FlgF — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS01810 amino acid permease 0.34 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS01810 amino acid permease 0.34 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.38 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.38 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS14635 proline-specific permease 0.53 RR42_RS35705 flagellar basal body rod protein FlgF low > 128
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1580 Histidine transport protein (permease) 0.34 Pf1N1B4_3568 Flagellar basal-body rod protein FlgF — —
Pseudomonas putida KT2440 0.63 PP_5031 proline (histidine) APC transporter 0.34 PP_4386 flagellar basal-body rod protein FlgF low > 96
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_318 Histidine transport protein (permease) 0.34 PfGW456L13_4387 Flagellar basal-body rod protein FlgF low > 87
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_12275 histidine permease (from data) 0.33 AO353_18595 flagellar biosynthesis protein FlgF low > 101
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS09765 amino acid permease 0.38 ABZR87_RS22270 flagellar basal-body rod protein FlgF low > 80
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS05185 amino acid permease 0.41 ABZR86_RS20095 flagellar basal-body rod protein FlgF low > 74
Pseudomonas sp. RS175 0.56 PFR28_03490 Proline-specific permease ProY 0.33 PFR28_00804 Flagellar basal-body rod protein FlgF low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_17670 L-alanine and D-alanine permease (from data) 0.33 AO356_03930 flagellar biosynthesis protein FlgF low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.33 Pf6N2E2_2628 Flagellar basal-body rod protein FlgF low > 103
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02640 amino acid permease 0.40 LRK55_RS13165 flagellar basal-body rod protein FlgF low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS02890 amino acid permease 0.40 LRK54_RS13425 flagellar basal-body rod protein FlgF low > 59
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_09870 Amino acid permease 0.41 OKGIIK_02670 flgF flagellar basal-body rod protein FlgF low > 52

Not shown: 3 genomes with orthologs for HER17_RS16015 only; 27 genomes with orthologs for HER17_RS08185 only