Conservation of cofitness between HER17_RS16015 and HER17_RS08135 in Pectobacterium carotovorum WPP14

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16015 proline-specific permease ProY 1.0 HER17_RS08135 flagellar type III secretion system protein FlhB 0.68 12
Dickeya dianthicola ME23 0.88 DZA65_RS05835 proline-specific permease ProY 0.77 DZA65_RS14040 flagellar type III secretion system protein FlhB low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS05510 proline-specific permease ProY 0.77 HGI48_RS13555 flagellar type III secretion system protein FlhB low > 71
Rahnella sp. WP5 0.85 EX31_RS22070 proline-specific permease ProY 0.61 EX31_RS11345 flagellar type III secretion system protein FlhB low > 89
Pantoea sp. MT58 0.83 IAI47_14830 proline-specific permease ProY 0.67 IAI47_08345 flagellar type III secretion system protein FlhB low > 76
Serratia liquefaciens MT49 0.83 IAI46_04800 proline-specific permease ProY 0.73 IAI46_16000 flagellar type III secretion system protein FlhB low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS05450 proline-specific permease ProY 0.77 DDA3937_RS13510 flagellar type III secretion system protein FlhB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4300 Proline-specific permease proY 0.66 GFF1661 Flagellar biosynthesis protein FlhB low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.64 EX28DRAFT_0680 flagellar biosynthetic protein FlhB low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_00989 Proline-specific permease ProY 0.65 MPMX20_02784 Flagellar biosynthetic protein FlhB low > 85
Escherichia coli ECOR38 0.78 HEPCGN_07170 proY proline-specific permease ProY 0.61 HEPCGN_04585 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia coli ECRC102 0.78 NIAGMN_06585 proY proline-specific permease ProY 0.61 NIAGMN_01895 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECOR27 0.78 NOLOHH_01460 proY proline-specific permease ProY 0.61 NOLOHH_16605 flhB flagellar biosynthesis protein FlhB low > 75
Escherichia coli BL21 0.78 ECD_00350 proline-specific permease 0.62 ECD_01851 flagellin export apparatus, substrate specificity protein low > 61
Escherichia coli BW25113 0.78 b0402 proY predicted cryptic proline transporter (NCBI) 0.62 b1880 flhB flagellar biosynthesis protein B (NCBI) low > 76
Escherichia coli ECRC98 0.78 JDDGAC_12185 proY proline-specific permease ProY 0.61 JDDGAC_00740 flhB flagellar biosynthesis protein FlhB low > 86
Escherichia coli ECRC101 0.78 MCAODC_27755 proY proline-specific permease ProY 0.61 MCAODC_19240 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia coli ECRC99 0.78 KEDOAH_19435 proY proline-specific permease ProY 0.61 KEDOAH_01940 flhB flagellar biosynthesis protein FlhB — —
Escherichia fergusonii Becca 0.78 EFB2_03655 Proline-specific permease ProY 0.62 EFB2_02063 Flagellar biosynthetic protein FlhB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03274 Proline-specific permease ProY 0.62 OHPLBJKB_01848 Flagellar biosynthetic protein FlhB low > 73
Escherichia coli ECRC100 0.78 OKFHMN_08530 proY proline-specific permease ProY 0.61 OKFHMN_26165 flhB flagellar biosynthesis protein FlhB low > 80
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02425 proline-specific permease ProY 0.62 ECOLIN_RS10740 flagellar biosynthesis protein FlhB low > 55
Escherichia coli ECRC62 0.78 BNILDI_22875 proY proline-specific permease ProY 0.61 BNILDI_15395 flhB flagellar biosynthesis protein FlhB low > 75
Erwinia tracheiphila SCR3 0.72 LU632_RS18885 proY proline-specific permease ProY 0.63 LU632_RS13510 flhB flagellar type III secretion system protein FlhB low > 74
Pseudomonas simiae WCS417 0.64 PS417_01755 proline-specific permease 0.34 PS417_19725 flagellar biosynthesis protein FlhB low > 88
Pseudomonas fluorescens SBW25 0.64 PFLU_RS01810 amino acid permease 0.35 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS01810 amino acid permease 0.35 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.36 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.36 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1580 Histidine transport protein (permease) 0.36 Pf1N1B4_3621 Flagellar biosynthesis protein FlhB low > 87
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS14635 proline-specific permease 0.49 RR42_RS35770 flagellar biosynthesis protein FlhB low > 128
Pseudomonas putida KT2440 0.63 PP_5031 proline (histidine) APC transporter 0.34 PP_4352 flagellin export apparatus, substrate specificity protein low > 96
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_12275 histidine permease (from data) 0.31 AO353_18760 flagellar biosynthetic protein FlhB low > 101
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_318 Histidine transport protein (permease) 0.36 PfGW456L13_4336 Flagellar biosynthesis protein FlhB low > 87
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS09765 amino acid permease 0.42 ABZR87_RS18015 flagellar biosynthesis protein FlhB low > 80
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS05185 amino acid permease 0.39 ABZR86_RS20245 flagellar biosynthesis protein FlhB low > 74
Pseudomonas sp. RS175 0.56 PFR28_03490 Proline-specific permease ProY 0.33 PFR28_00848 Flagellar biosynthetic protein FlhB low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_17670 L-alanine and D-alanine permease (from data) 0.33 AO356_03755 flagellar biosynthetic protein FlhB low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.33 Pf6N2E2_2577 Flagellar biosynthesis protein FlhB low > 103
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02640 amino acid permease 0.38 LRK55_RS13300 flagellar biosynthesis protein FlhB low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS02890 amino acid permease 0.38 LRK54_RS13560 flagellar biosynthesis protein FlhB low > 59
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_09870 Amino acid permease 0.35 OKGIIK_02810 flhB flagellar biosynthesis protein FlhB low > 52
Brevundimonas sp. GW460-12-10-14-LB2 0.10 A4249_RS06560 amino acid permease 0.27 A4249_RS15235 flagellar biosynthesis protein FlhB low > 48

Not shown: 1 genomes with orthologs for HER17_RS16015 only; 41 genomes with orthologs for HER17_RS08135 only