Conservation of cofitness between HER17_RS11650 and HER17_RS08105 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11650 cupin domain-containing protein 1.0 HER17_RS08105 chemotaxis protein CheW 0.71 3
Serratia liquefaciens MT49 0.84 IAI46_10385 cupin domain-containing protein 0.93 IAI46_16035 chemotaxis protein CheW low > 86
Dickeya dianthicola 67-19 0.83 HGI48_RS11555 cupin domain-containing protein 0.96 HGI48_RS13585 chemotaxis protein CheW low > 71
Dickeya dianthicola ME23 0.83 DZA65_RS11890 cupin domain-containing protein 0.96 DZA65_RS14070 chemotaxis protein CheW low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS11510 cupin domain-containing protein 0.96 DDA3937_RS13540 chemotaxis protein CheW low > 74
Enterobacter asburiae PDN3 0.82 EX28DRAFT_1802 Uncharacterized conserved protein 0.89 EX28DRAFT_0663 Chemotaxis signal transduction protein low > 76
Rahnella sp. WP5 0.81 EX31_RS24550 cupin domain-containing protein 0.89 EX31_RS11400 chemotaxis protein CheW low > 89
Enterobacter sp. TBS_079 0.80 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.88 MPMX20_02797 Chemotaxis protein CheW low > 85
Escherichia coli BW25113 0.80 b1128 ycfD orf, hypothetical protein (VIMSS) 0.88 b1887 cheW purine-binding chemotaxis protein (NCBI) low > 76
Escherichia coli ECRC62 0.80 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 BNILDI_15355 cheW chemotaxis protein CheW low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3413 FIG002776: hypothetical protein 0.89 GFF1668 Positive regulator of CheA protein activity (CheW) low > 78
Escherichia fergusonii Becca 0.80 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.88 EFB2_02056 Chemotaxis protein CheW low > 86
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 ECOLIN_RS10775 chemotaxis protein CheW low > 55
Escherichia coli ECOR38 0.80 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 HEPCGN_04545 cheW chemotaxis protein CheW low > 87
Escherichia coli BL21 0.80 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.88 ECD_01858 purine-binding chemotaxis protein — —
Escherichia coli ECOR27 0.80 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 NOLOHH_16565 cheW chemotaxis protein CheW low > 75
Escherichia coli ECRC100 0.80 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 OKFHMN_26125 cheW chemotaxis protein CheW low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.88 OHPLBJKB_01841 Chemotaxis protein CheW low > 73
Escherichia coli ECRC102 0.80 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 NIAGMN_01935 cheW chemotaxis protein CheW — —
Escherichia coli ECRC101 0.80 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 MCAODC_19280 cheW chemotaxis protein CheW low > 87
Escherichia coli ECRC99 0.80 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 KEDOAH_01980 cheW chemotaxis protein CheW — —
Escherichia coli ECRC98 0.80 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.88 JDDGAC_00700 cheW chemotaxis protein CheW low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS14600 cupin domain-containing protein 0.88 LU632_RS13555 cheW chemotaxis protein CheW low > 74
Pantoea sp. MT58 0.76 IAI47_11940 cupin domain-containing protein 0.88 IAI47_08305 chemotaxis protein CheW low > 76
Shewanella oneidensis MR-1 0.43 SO2636 conserved hypothetical protein (NCBI ptt file) 0.54 SO2122 cheW-1 purine-binding chemotaxis protein CheW (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.42 Shewana3_1744 cupin 4 family protein (RefSeq) 0.55 Shewana3_2217 CheW protein (RefSeq) low > 73
Shewanella loihica PV-4 0.41 Shew_1557 cupin 4 family protein (RefSeq) 0.45 Shew_0112 CheW protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.34 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.33 MIT1002_01110 Chemotaxis protein CheW low > 70
Marinobacter adhaerens HP15 0.31 HP15_2089 cupin 4 family protein 0.31 HP15_2292 purine-binding chemotaxis protein CheW — —
Paraburkholderia graminis OAS925 0.27 ABIE53_002722 50S ribosomal protein L16 3-hydroxylase 0.70 ABIE53_000124 purine-binding chemotaxis protein CheW low > 113
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase 0.70 H281DRAFT_05743 CheW protein low > 103
Castellaniella sp019104865 MT123 0.25 ABCV34_RS00265 cupin domain-containing protein 0.58 ABCV34_RS05830 chemotaxis protein CheW low > 48
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS12490 cupin 0.71 BPHYT_RS18995 purine-binding chemotaxis protein low > 109
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS06070 cupin domain-containing protein 0.69 QEN71_RS29005 chemotaxis protein CheW 0.75 109
Ralstonia solanacearum GMI1000 0.24 RS_RS05720 cupin domain-containing protein 0.68 RS_RS23915 chemotaxis protein CheW — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS14905 cupin domain-containing protein 0.67 RALBFv3_RS17395 chemotaxis protein CheW — —
Ralstonia solanacearum UW163 0.24 UW163_RS12375 cupin domain-containing protein 0.67 UW163_RS21755 chemotaxis protein CheW — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18455 cupin domain-containing protein 0.68 RPSI07_RS06250 chemotaxis protein CheW low > 81
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS06270 cupin 0.69 RR42_RS35800 chemotaxis protein CheW low > 128
Variovorax sp. SCN45 0.22 GFF2745 FIG074102: hypothetical protein 0.60 GFF5730 Positive regulator of CheA protein activity (CheW) — —

Not shown: 3 genomes with orthologs for HER17_RS11650 only; 43 genomes with orthologs for HER17_RS08105 only