Conservation of cofitness between HER17_RS11650 and HER17_RS08100 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11650 cupin domain-containing protein 1.0 HER17_RS08100 chemotaxis protein CheA 0.72 2
Serratia liquefaciens MT49 0.84 IAI46_10385 cupin domain-containing protein 0.76 IAI46_16040 chemotaxis protein CheA low > 86
Dickeya dianthicola 67-19 0.83 HGI48_RS11555 cupin domain-containing protein 0.82 HGI48_RS13590 chemotaxis protein CheA low > 71
Dickeya dianthicola ME23 0.83 DZA65_RS11890 cupin domain-containing protein 0.81 DZA65_RS14075 chemotaxis protein CheA low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS11510 cupin domain-containing protein 0.84 DDA3937_RS13545 chemotaxis protein CheA low > 74
Enterobacter asburiae PDN3 0.82 EX28DRAFT_1802 Uncharacterized conserved protein 0.72 EX28DRAFT_0662 Chemotaxis protein histidine kinase and related kinases low > 76
Rahnella sp. WP5 0.81 EX31_RS24550 cupin domain-containing protein 0.76 EX31_RS11405 chemotaxis protein CheA low > 89
Enterobacter sp. TBS_079 0.80 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.72 MPMX20_02798 Chemotaxis protein CheA low > 85
Escherichia coli ECRC62 0.80 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.72 BNILDI_15350 cheA chemotaxis protein CheA low > 75
Escherichia coli BW25113 0.80 b1128 ycfD orf, hypothetical protein (VIMSS) 0.71 b1888 cheA fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3413 FIG002776: hypothetical protein 0.72 GFF1669 Signal transduction histidine kinase CheA (EC 2.7.3.-) low > 78
Escherichia fergusonii Becca 0.80 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.71 EFB2_02055 Chemotaxis protein CheA low > 86
Escherichia coli ECOR27 0.80 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.72 NOLOHH_16560 cheA chemotaxis protein CheA low > 75
Escherichia coli ECOR38 0.80 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.71 HEPCGN_04540 cheA chemotaxis protein CheA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.71 OHPLBJKB_01840 Chemotaxis protein CheA low > 73
Escherichia coli ECRC99 0.80 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.72 KEDOAH_01985 cheA chemotaxis protein CheA — —
Escherichia coli ECRC100 0.80 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.71 OKFHMN_26120 cheA chemotaxis protein CheA low > 80
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.71 ECOLIN_RS10780 chemotaxis protein CheA — —
Escherichia coli ECRC98 0.80 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.72 JDDGAC_00695 cheA chemotaxis protein CheA low > 86
Escherichia coli BL21 0.80 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.71 ECD_01859 fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein low > 61
Escherichia coli ECRC101 0.80 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.72 MCAODC_19285 cheA chemotaxis protein CheA low > 87
Escherichia coli ECRC102 0.80 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.72 NIAGMN_01940 cheA chemotaxis protein CheA — —
Erwinia tracheiphila SCR3 0.79 LU632_RS14600 cupin domain-containing protein 0.75 LU632_RS13560 cheA chemotaxis protein CheA low > 74
Pantoea sp. MT58 0.76 IAI47_11940 cupin domain-containing protein 0.73 IAI47_08300 chemotaxis protein CheA low > 76
Shewanella oneidensis MR-1 0.43 SO2636 conserved hypothetical protein (NCBI ptt file) 0.39 SO2121 cheA chemotaxis protein CheA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.42 Shewana3_1744 cupin 4 family protein (RefSeq) 0.39 Shewana3_2218 CheA signal transduction histidine kinases (RefSeq) low > 73
Shewanella loihica PV-4 0.41 Shew_1557 cupin 4 family protein (RefSeq) 0.36 Shew_0113 CheA signal transduction histidine kinase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_2065 cupin 4 (RefSeq) 0.36 Sama_3495 putative CheA signal transduction histidine kinase (RefSeq) low > 62
Paraburkholderia graminis OAS925 0.27 ABIE53_002722 50S ribosomal protein L16 3-hydroxylase 0.13 ABIE53_000125 two-component system chemotaxis sensor kinase CheA low > 113
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase 0.13 H281DRAFT_05742 CheA signal transduction histidine kinase low > 103
Castellaniella sp019104865 MT123 0.25 ABCV34_RS00265 cupin domain-containing protein 0.52 ABCV34_RS05835 chemotaxis protein CheA low > 48
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS12490 cupin 0.55 BPHYT_RS19000 chemotaxis protein CheA low > 109
Ralstonia solanacearum GMI1000 0.24 RS_RS05720 cupin domain-containing protein 0.40 RS_RS23920 chemotaxis protein CheA — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS14905 cupin domain-containing protein 0.40 RALBFv3_RS17390 chemotaxis protein CheA — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18455 cupin domain-containing protein 0.41 RPSI07_RS06255 chemotaxis protein CheA low > 81
Ralstonia solanacearum UW163 0.24 UW163_RS12375 cupin domain-containing protein 0.40 UW163_RS21760 chemotaxis protein CheA — —
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS06270 cupin 0.54 RR42_RS35805 chemotaxis protein CheA low > 128
Variovorax sp. SCN45 0.22 GFF2745 FIG074102: hypothetical protein 0.53 GFF5763 Signal transduction histidine kinase CheA low > 127

Not shown: 5 genomes with orthologs for HER17_RS11650 only; 27 genomes with orthologs for HER17_RS08100 only