Conservation of cofitness between HER17_RS12495 and HER17_RS07055 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12495 putrescine ABC transporter ATP-binding subunit PotG 1.0 HER17_RS07055 dihydroneopterin triphosphate 2'-epimerase 0.52 17
Serratia liquefaciens MT49 0.90 IAI46_08375 putrescine ABC transporter ATP-binding subunit PotG 0.78 IAI46_17775 dihydroneopterin triphosphate 2'-epimerase low > 86
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2098 spermidine/putrescine ABC transporter ATP-binding subunit 0.75 EX28DRAFT_0301 FolB domain low > 76
Escherichia coli BW25113 0.89 b0855 potG ATP-binding component of putrescine transport system (VIMSS) 0.75 b2303 folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_02813 Spermidine/putrescine import ATP-binding protein PotA 0.75 OHPLBJKB_01402 'Dihydroneopterin triphosphate 2'-epimerase' transl_table=11 low > 73
Escherichia coli BL21 0.89 ECD_00860 putrescine ABC transporter ATPase 0.75 ECD_02228 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase low > 61
Escherichia coli ECRC98 0.89 JDDGAC_09590 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 JDDGAC_26725 folX dihydroneopterin triphosphate 2'-epimerase low > 86
Escherichia coli ECRC99 0.89 KEDOAH_21955 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 KEDOAH_05435 folX dihydroneopterin triphosphate 2'-epimerase
Escherichia coli ECRC102 0.89 NIAGMN_04000 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 NIAGMN_20530 folX dihydroneopterin triphosphate 2'-epimerase
Escherichia fergusonii Becca 0.89 EFB2_03206 Spermidine/putrescine import ATP-binding protein PotA 0.75 EFB2_01555 Dihydroneopterin triphosphate 2'-epimerase low > 86
Escherichia coli ECRC101 0.89 MCAODC_25170 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 MCAODC_13800 folX dihydroneopterin triphosphate 2'-epimerase low > 87
Escherichia coli ECRC62 0.89 BNILDI_20580 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 BNILDI_13300 folX dihydroneopterin triphosphate 2'-epimerase low > 75
Enterobacter sp. TBS_079 0.89 MPMX20_01496 Spermidine/putrescine import ATP-binding protein PotA 0.74 MPMX20_03238 Dihydroneopterin triphosphate 2'-epimerase low > 85
Escherichia coli ECRC100 0.89 OKFHMN_05955 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 OKFHMN_22760 folX dihydroneopterin triphosphate 2'-epimerase low > 80
Escherichia coli ECOR27 0.89 NOLOHH_22325 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 NOLOHH_14380 folX dihydroneopterin triphosphate 2'-epimerase low > 75
Escherichia coli Nissle 1917 0.89 ECOLIN_RS04555 putrescine ABC transporter ATP-binding subunit PotG 0.75 ECOLIN_RS13365 dihydroneopterin triphosphate 2'-epimerase
Klebsiella michiganensis M5al 0.88 BWI76_RS09465 polyamine ABC transporter ATP-binding protein 0.75 BWI76_RS20295 dihydroneopterin triphosphate 2'-epimerase low > 92
Escherichia coli ECOR38 0.88 HEPCGN_02075 potG putrescine ABC transporter ATP-binding subunit PotG 0.75 HEPCGN_21965 folX dihydroneopterin triphosphate 2'-epimerase low > 87
Shewanella amazonensis SB2B 0.60 Sama_2641 polyamine ABC transporter, ATP-binding protein (RefSeq) 0.63 Sama_1489 folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase (RefSeq)
Shewanella loihica PV-4 0.60 Shew_0974 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) 0.67 Shew_2399 folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase (RefSeq)
Shewanella sp. ANA-3 0.59 Shewana3_3096 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) 0.68 Shewana3_1543 folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO1271 polyamine ABC transporter, ATP-binding protein (NCBI ptt file) 0.68 SO2921 folX D-erythro-7,8-dihydroneopterin triphosphate epimerase (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.58 HP15_939 spermidine/putrescine ABC transporter ATPase subunit 0.57 HP15_3530 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase low > 73
Pseudomonas stutzeri RCH2 0.58 Psest_4282 spermidine/putrescine ABC transporter ATP-binding subunit 0.59 Psest_3205 FolB domain low > 67
Pseudomonas sp. S08-1 0.58 OH686_11455 Putrescine transport ATP-binding protein PotG 0.58 OH686_18760 D-erythro-7,8-dihydroneopterin triphosphate epimerase low > 80
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4352 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.54 Pf1N1B4_1042 Dihydroneopterin triphosphate epimerase low > 87
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_29310 transporter 0.54 AO353_04965 D-erythro-7,8-dihydroneopterin triphosphate epimerase low > 101
Pseudomonas simiae WCS417 0.56 PS417_27115 putrescine ABC transporter, ATPase component (from data) 0.54 PS417_23500 D-erythro-7,8-dihydroneopterin triphosphate epimerase low > 88
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_930 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.54 PfGW456L13_4979 Dihydroneopterin triphosphate epimerase low > 87
Pseudomonas fluorescens SBW25 0.56 PFLU_RS28765 polyamine ABC transporter ATP-binding protein 0.55 PFLU_RS25315 dihydroneopterin triphosphate 2'-epimerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS28765 polyamine ABC transporter ATP-binding protein 0.55 PFLU_RS25315 dihydroneopterin triphosphate 2'-epimerase low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_13165 transporter 0.56 AO356_16735 D-erythro-7,8-dihydroneopterin triphosphate epimerase low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4515 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.56 Pf6N2E2_5272 Dihydroneopterin triphosphate epimerase low > 103
Pseudomonas sp. RS175 0.55 PFR28_04293 Spermidine/putrescine import ATP-binding protein PotA 0.58 PFR28_00206 'Dihydroneopterin triphosphate 2'-epimerase' transl_table=11 low > 88
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit 0.59 Psyr_1019 Dihydroneopterin aldolase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit 0.59 Psyr_1019 Dihydroneopterin aldolase low > 86

Not shown: 29 genomes with orthologs for HER17_RS12495 only; 1 genomes with orthologs for HER17_RS07055 only