Conservation of cofitness between HER17_RS01970 and HER17_RS06985 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01970 SlyX family protein 1.0 HER17_RS06985 aspartate-semialdehyde dehydrogenase 0.58 6
Dickeya dadantii 3937 0.74 DDA3937_RS19365 SlyX family protein 0.84 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase — —
Dickeya dianthicola ME23 0.73 DZA65_RS20585 phi X174 lysis protein 0.84 DZA65_RS15375 aspartate-semialdehyde dehydrogenase — —
Dickeya dianthicola 67-19 0.73 HGI48_RS19495 SlyX family protein 0.84 HGI48_RS14440 aspartate-semialdehyde dehydrogenase — —
Rahnella sp. WP5 0.70 EX31_RS04480 lysis protein 0.80 EX31_RS19605 aspartate-semialdehyde dehydrogenase low > 89
Erwinia tracheiphila SCR3 0.68 LU632_RS22720 SlyX family protein 0.72 LU632_RS07820 aspartate-semialdehyde dehydrogenase low > 74
Escherichia coli ECRC101 0.68 MCAODC_07820 slyX Protein SlyX 0.70 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC102 0.68 NIAGMN_15060 slyX Protein SlyX 0.70 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC100 0.68 OKFHMN_17290 slyX Protein SlyX 0.70 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00355 Protein SlyX 0.70 OHPLBJKB_01386 USG-1 protein low > 73
Escherichia fergusonii Becca 0.68 EFB2_00475 Protein SlyX 0.70 EFB2_01539 USG-1 protein low > 86
Escherichia coli BL21 0.68 ECD_03199 phi X174 lysis protein 0.70 ECD_02244 putative semialdehyde dehydrogenase 0.34 44
Escherichia coli ECRC62 0.68 BNILDI_02430 slyX Protein SlyX 0.70 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECOR38 0.68 HEPCGN_16120 slyX Protein SlyX 0.70 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC99 0.68 KEDOAH_10850 slyX Protein SlyX 0.70 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli BW25113 0.68 b3348 slyX hypothetical protein (NCBI) 0.70 b2319 usg hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.68 ECOLIN_RS19175 protein SlyX 0.70 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC98 0.68 JDDGAC_20920 slyX Protein SlyX 0.70 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECOR27 0.68 NOLOHH_09090 slyX Protein SlyX 0.70 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase — —
Klebsiella michiganensis M5al 0.67 BWI76_RS25915 protein SlyX 0.69 BWI76_RS20385 aspartate-semialdehyde dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3724 Protein SlyX 0.72 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) — —
Pantoea sp. MT58 0.67 IAI47_02045 SlyX family protein 0.72 IAI47_06240 aspartate-semialdehyde dehydrogenase low > 76
Enterobacter sp. TBS_079 0.67 MPMX20_04241 Protein SlyX 0.69 MPMX20_03254 USG-1 protein low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4182 Uncharacterized protein conserved in bacteria 0.67 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase low > 76
Serratia liquefaciens MT49 0.65 IAI46_23500 SlyX family protein 0.82 IAI46_17845 aspartate-semialdehyde dehydrogenase low > 86
Shewanella sp. ANA-3 0.50 Shewana3_0901 SlyX family protein (RefSeq) 0.47 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) — —
Shewanella amazonensis SB2B 0.48 Sama_0640 SlyX protein (RefSeq) 0.47 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) — —
Shewanella loihica PV-4 0.48 Shew_0838 SlyX family protein (RefSeq) 0.47 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO1063 slyX slyX protein (NCBI ptt file) 0.47 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_01860 SlyX protein 0.48 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 low > 62
Rhodospirillum rubrum S1H 0.43 Rru_A0103 SlyX (NCBI) 0.32 Rru_A1196 Aspartate-semialdehyde dehydrogenase, USG-1 related (NCBI) — —
Pseudomonas putida KT2440 0.38 PP_1208 conserved protein of unknown function, SlyX family 0.30 PP_1992 aspartate-semialdehyde dehydrogenase low > 96
Pseudomonas sp. S08-1 0.37 OH686_19090 Protein SlyX 0.33 OH686_04460 Aspartate-semialdehyde dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.36 Psest_1490 Uncharacterized protein conserved in bacteria 0.27 Psest_2587 Aspartate-semialdehyde dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03620 hypothetical protein 0.34 AO353_20645 aspartate-semialdehyde dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_1844 Protein SlyX 0.35 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) — —
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_17980 hypothetical protein 0.35 AO356_21425 aspartate-semialdehyde dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1402 SlyX 0.32 Psyr_1660 Aspartate-semialdehyde dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1402 SlyX 0.32 Psyr_1660 Aspartate-semialdehyde dehydrogenase low > 86

Not shown: 1 genomes with orthologs for HER17_RS01970 only; 44 genomes with orthologs for HER17_RS06985 only