Conservation of cofitness between HER17_RS03455 and HER17_RS05930 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS03455 D-threonate 4-phosphate dehydrogenase 1.0 HER17_RS05930 nitrogen regulatory protein P-II 0.86 19
Dickeya dadantii 3937 0.92 DDA3937_RS17835 D-threonate 4-phosphate dehydrogenase 0.97 DDA3937_RS15635 nitrogen regulatory protein P-II low > 74
Dickeya dianthicola 67-19 0.91 HGI48_RS17775 D-threonate 4-phosphate dehydrogenase 0.97 HGI48_RS15730 nitrogen regulatory protein P-II low > 71
Dickeya dianthicola ME23 0.91 DZA65_RS18920 D-threonate 4-phosphate dehydrogenase 0.97 DZA65_RS16810 nitrogen regulatory protein P-II low > 75
Pantoea sp. MT58 0.84 IAI47_15730 D-threonate 4-phosphate dehydrogenase 0.97 IAI47_04950 nitrogen regulatory protein P-II low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS04955 D-threonate 4-phosphate dehydrogenase 0.95 LU632_RS17925 glnB nitrogen regulatory protein P-II — —
Klebsiella michiganensis M5al 0.81 BWI76_RS15230 4-hydroxythreonine-4-phosphate dehydrogenase 0.95 BWI76_RS21245 nitrogen regulatory protein P-II low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF110 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 0.95 GFF2454 Nitrogen regulatory protein P-II low > 78
Escherichia fergusonii Becca 0.80 EFB2_03416 D-threonate 4-phosphate dehydrogenase 0.95 EFB2_01343 Nitrogen regulatory protein P-II 1 low > 86
Escherichia coli Nissle 1917 0.80 ECOLIN_RS03665 D-threonate 4-phosphate dehydrogenase 0.95 ECOLIN_RS14450 nitrogen regulatory protein P-II — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0923 4-hydroxythreonine-4-phosphate dehydrogenase 0.41 Echvi_1453 Nitrogen regulatory protein PII low > 79
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS06570 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.80 QEN71_RS24890 P-II family nitrogen regulator low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_003878 4-hydroxythreonine-4-phosphate dehydrogenase 0.79 ABIE53_001346 nitrogen regulatory protein P-II 1 low > 113
Sinorhizobium meliloti 1021 0.41 SM_b20146 pyridoxal phosphate biosynthetic protein 0.74 SMc00947 nitrogen regulatory protein PII — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_00649 4-hydroxythreonine-4-phosphate dehydrogenase 0.79 H281DRAFT_00219 nitrogen regulatory protein P-II family — —
Rhizobium sp. OAE497 0.40 ABIE40_RS25790 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.73 ABIE40_RS09340 P-II family nitrogen regulator — —
Variovorax sp. OAS795 0.40 ABID97_RS25690 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.80 ABID97_RS14850 P-II family nitrogen regulator low > 91
Azospirillum brasilense Sp245 0.39 AZOBR_RS27610 4-hydroxythreonine-4-phosphate dehydrogenase 0.75 AZOBR_RS07100 nitrogen regulatory protein P-II 1 — —
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS05840 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.78 ABZR87_RS16080 P-II family nitrogen regulator low > 80
Agrobacterium fabrum C58 0.39 Atu5073 pyridoxal phosphate biosynthesis protein 0.74 Atu1769 nitrogen regulatory protein PII — —
Azospirillum sp. SherDot2 0.39 MPMX19_02810 D-threonate 4-phosphate dehydrogenase 0.76 MPMX19_01554 Nitrogen regulatory protein P-II — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS02270 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.72 ABCV34_RS03065 P-II family nitrogen regulator — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF1297 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 0.79 GFF4272 Nitrogen regulatory protein P-II — —
Variovorax sp. SCN45 0.38 GFF5368 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 0.80 GFF1151 Nitrogen regulatory protein P-II — —
Bosea sp. OAE506 0.34 ABIE41_RS20430 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.74 ABIE41_RS16890 P-II family nitrogen regulator — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01758 4-hydroxythreonine-4-phosphate dehydrogenase 0.73 CCNA_02046 nitrogen regulatory protein P-II — —
Caulobacter crescentus NA1000 0.33 CCNA_01758 4-hydroxythreonine-4-phosphate dehydrogenase 0.73 CCNA_02046 nitrogen regulatory protein P-II — —
Rhodopseudomonas palustris CGA009 0.32 TX73_015855 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.75 TX73_015385 P-II family nitrogen regulator — —
Rhodospirillum rubrum S1H 0.31 Rru_A0432 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) 0.76 Rru_A1130 Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS06755 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.76 A4249_RS05675 P-II family nitrogen regulator — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_2444 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) 0.69 Dshi_0143 nitrogen regulatory protein P-II (RefSeq) — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_0804 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 0.64 Synpcc7942_0321 glnB nitrogen regulatory protein P-II — —
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0837 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) 0.65 DvMF_0865 nitrogen regulatory protein P-II (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_03840 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.27 CA264_21345 transcriptional regulator — —

Not shown: 5 genomes with orthologs for HER17_RS03455 only; 44 genomes with orthologs for HER17_RS05930 only