Conservation of cofitness between HER17_RS12030 and HER17_RS05375 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS05375 3-deoxy-7-phosphoheptulonate synthase 0.91 7
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.85 IAI46_03955 3-deoxy-7-phosphoheptulonate synthase 0.52 36
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.81 BNILDI_11695 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 75
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.81 ECD_02490 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.81 HEPCGN_20335 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 87
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.81 b2601 aroF 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) 0.57 44
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.81 NOLOHH_12890 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.76 59
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.81 OHPLBJKB_01107 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 73
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.84 EX31_RS07595 3-deoxy-7-phosphoheptulonate synthase low > 89
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.81 ECOLIN_RS14705 3-deoxy-7-phosphoheptulonate synthase AroF
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.80 EFB2_01291 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 86
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.81 MCAODC_11745 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.70 35
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.81 KEDOAH_07005 aroF 3-deoxy-7-phosphoheptulonate synthase AroF
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.81 NIAGMN_18985 aroF 3-deoxy-7-phosphoheptulonate synthase AroF
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.81 JDDGAC_24880 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 86
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.81 OKFHMN_21215 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 80
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.88 HGI48_RS16260 3-deoxy-7-phosphoheptulonate synthase
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.80 BWI76_RS21480 phospho-2-dehydro-3-deoxyheptonate aldolase 0.30 39
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.80 MPMX20_03469 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.50 9
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.80 GFF4176 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.89 DDA3937_RS16140 3-deoxy-7-phosphoheptulonate synthase
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.80 EX28DRAFT_2702 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.88 DZA65_RS17355 3-deoxy-7-phosphoheptulonate synthase
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.82 IAI47_04400 3-deoxy-7-phosphoheptulonate synthase low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.79 LU632_RS15450 3-deoxy-7-phosphoheptulonate synthase low > 74
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.66 Shew_1067 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) low > 60
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.67 Shewana3_3013 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.64 Sama_0893 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.66 SO1361 aroF phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.72 CSW01_03635 3-deoxy-7-phosphoheptulonate synthase low > 62
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.60 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.61 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 103
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.61 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.61 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase low > 109
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.61 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase low > 88
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.61 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 87
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.60 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 88
Marinobacter adhaerens HP15 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) 0.58 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase low > 73
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.60 OH686_01760 3-deoxy-7-phosphoheptulonate synthase low > 80
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.62 MIT1002_01314 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.61 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.61 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 86

Not shown: 10 genomes with orthologs for HER17_RS12030 only; 8 genomes with orthologs for HER17_RS05375 only