Conservation of cofitness between HER17_RS11985 and HER17_RS03305 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11985 ABC transporter ATP-binding protein 1.0 HER17_RS03305 LysR family transcriptional regulator 0.70 20
Dickeya dianthicola ME23 0.84 DZA65_RS13370 ABC transporter ATP-binding protein 0.32 DZA65_RS14555 LysR family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.80 IAI46_08825 ABC transporter ATP-binding protein 0.59 IAI46_12105 LysR family transcriptional regulator low > 86
Rahnella sp. WP5 0.79 EX31_RS18075 ABC transporter ATP-binding protein 0.69 EX31_RS20705 LysR family transcriptional regulator low > 89
Enterobacter asburiae PDN3 0.76 EX28DRAFT_1994 ATPase components of ABC transporters with duplicated ATPase domains 0.33 EX28DRAFT_3985 Transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01600 ABC transporter ATP-binding protein uup 0.33 MPMX20_00005 HTH-type transcriptional regulator PgrR low > 85
Klebsiella michiganensis M5al 0.74 BWI76_RS09930 ABC transporter ATPase 0.33 BWI76_RS27965 LysR family transcriptional regulator low > 92
Alteromonas macleodii MIT1002 0.53 MIT1002_02038 ABC transporter ATP-binding protein uup 0.30 MIT1002_02674 D-malate degradation protein R low > 70
Shewanella amazonensis SB2B 0.53 Sama_1602 ABC transporter ATPase component (RefSeq) 0.30 Sama_0005 LysR, substrate-binding (RefSeq) low > 62
Shewanella loihica PV-4 0.52 Shew_1814 ABC transporter ATPase component (RefSeq) 0.33 Shew_1539 LysR family transcriptional regulator (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS11545 ATP-binding cassette domain-containing protein 0.60 ABZR86_RS14400 LysR family transcriptional regulator low > 74
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_3899 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.59 Pf1N1B4_4897 Transcriptional regulator, LysR family low > 87
Pseudomonas simiae WCS417 0.45 PS417_07555 ABC transporter ATPase 0.62 PS417_17205 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.62 PFLU_RS19135 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.62 PFLU_RS19135 LysR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.45 PP_2131 DNA-binding ATPase involved in replication 0.31 PP_1164 Transcriptional regulator, LysR family low > 96
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_02345 ABC transporter ATP-binding protein 0.61 AO356_26885 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2293 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.61 Pf6N2E2_1182 Transcriptional regulator, LysR family low > 103
Pseudomonas sp. RS175 0.44 PFR28_01107 ABC transporter ATP-binding protein uup 0.54 PFR28_02009 HTH-type transcriptional regulator PgrR low > 88
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS24715 ATP-binding cassette domain-containing protein 0.53 QEN71_RS13435 LysR family transcriptional regulator low > 153
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS14685 ABC transporter ATP-binding protein 0.76 RR42_RS26575 LysR family transcriptional regulator low > 128
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_3294 ABC transporter 0.59 Psyr_3062 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_3294 ABC transporter 0.59 Psyr_3062 transcriptional regulator, LysR family low > 86
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS05925 ABC transporter ATP-binding protein 0.53 BPHYT_RS20380 LysR family transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.41 ABIE53_001391 ATP-binding cassette subfamily F protein uup 0.52 ABIE53_001468 DNA-binding transcriptional LysR family regulator low > 113
Variovorax sp. SCN45 0.39 GFF3812 Bis-ABC ATPase Uup 0.63 GFF2735 Transcriptional regulator, LysR family low > 127
Magnetospirillum magneticum AMB-1 0.34 AMB_RS04385 elongation factor 3 0.35 AMB_RS01140 LysR family transcriptional regulator low > 64
Azospirillum brasilense Sp245 0.34 AZOBR_RS12260 elongation factor 3 0.86 AZOBR_RS21020 LysR family transcriptional regulator — —
Azospirillum sp. SherDot2 0.33 MPMX19_01666 ABC transporter ATP-binding protein uup 0.87 MPMX19_06917 HTH-type transcriptional regulator PgrR low > 112
Agrobacterium fabrum C58 0.31 Atu2716 ABC transporter, nucleotide binding/ATPase protein 0.53 Atu4271 LysR family transcriptional regulator low > 89
Bosea sp. OAE506 0.31 ABIE41_RS11105 ATP-binding cassette domain-containing protein 0.31 ABIE41_RS06370 LysR family transcriptional regulator low > 77
Rhizobium sp. OAE497 0.30 ABIE40_RS18605 ABC-F family ATP-binding cassette domain-containing protein 0.51 ABIE40_RS04915 LysR family transcriptional regulator low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10210 ABC-F family ATP-binding cassette domain-containing protein 0.31 A4249_RS02150 LysR substrate-binding domain-containing protein low > 48

Not shown: 53 genomes with orthologs for HER17_RS11985 only; 0 genomes with orthologs for HER17_RS03305 only