Conservation of cofitness between HER17_RS00665 and HER17_RS02600 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 1.0 HER17_RS02600 protease modulator HflC 0.88 1
Pantoea sp. MT58 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR 0.77 IAI47_02605 protease modulator HflC 0.66 12
Erwinia tracheiphila SCR3 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR 0.79 LU632_RS02070 hflC protease modulator HflC low > 74
Rahnella sp. WP5 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.77 EX31_RS08805 protease modulator HflC low > 89
Dickeya dadantii 3937 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR 0.82 DDA3937_RS18595 protease modulator HflC — —
Dickeya dianthicola ME23 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.82 DZA65_RS19665 protease modulator HflC low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.82 HGI48_RS18530 protease modulator HflC low > 71
Enterobacter sp. TBS_079 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR 0.74 MPMX20_00456 Modulator of FtsH protease HflC 0.44 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR 0.77 GFF828 HflC protein low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.73 EX28DRAFT_3372 HflC protein low > 76
Escherichia coli ECRC102 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR 0.77 NIAGMN_10090 hflC protease modulator HflC — —
Escherichia coli ECRC98 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR 0.77 JDDGAC_15880 hflC protease modulator HflC low > 86
Escherichia coli BL21 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA 0.77 ECD_04042 HflB protease modulator specific for phage lambda cII repressor low > 61
Escherichia coli ECRC101 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR 0.77 MCAODC_02755 hflC protease modulator HflC low > 87
Klebsiella michiganensis M5al 0.85 BWI76_RS00720 DNA-binding response regulator 0.75 BWI76_RS02550 protease modulator HflC 0.36 34
Escherichia coli ECRC99 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR 0.77 KEDOAH_15915 hflC protease modulator HflC — —
Escherichia coli ECOR38 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.77 HEPCGN_10470 hflC protease modulator HflC low > 87
Escherichia coli BW25113 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) 0.77 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.52 7
Escherichia coli ECRC62 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR 0.77 BNILDI_06985 hflC protease modulator HflC low > 75
Escherichia coli ECRC100 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR 0.77 OKFHMN_12240 hflC protease modulator HflC 0.70 36
Escherichia coli ECOR27 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR 0.77 NOLOHH_04505 hflC protease modulator HflC low > 75
Escherichia coli Nissle 1917 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR 0.77 ECOLIN_RS24245 protease modulator HflC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR 0.77 OHPLBJKB_03867 Modulator of FtsH protease HflC low > 73
Escherichia fergusonii Becca 0.85 EFB2_04705 Transcriptional regulatory protein CpxR 0.77 EFB2_04360 Modulator of FtsH protease HflC low > 86
Serratia liquefaciens MT49 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR 0.81 IAI46_01640 protease modulator HflC low > 86
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_13590 DNA-binding response regulator 0.49 CSW01_01850 protease modulator HflC low > 62
Shewanella loihica PV-4 0.54 Shew_3570 two component transcriptional regulator (RefSeq) 0.46 Shew_0569 HflC protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.52 Sama_3432 response regulator receiver protein (RefSeq) 0.45 Sama_3022 hflC protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.50 Shewana3_0253 two component transcriptional regulator (RefSeq) 0.48 Shewana3_0600 HflC protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) 0.47 SO0606 hflC hflC protein (NCBI ptt file) low > 76
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS07815 response regulator 0.29 ABZR86_RS08350 protease modulator HflC low > 74
Alteromonas macleodii MIT1002 0.47 MIT1002_00477 Response regulator ArlR 0.48 MIT1002_03785 Modulator of FtsH protease HflC 0.42 43
Pseudomonas stutzeri RCH2 0.40 Psest_1884 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.29 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs — —
Pseudomonas sp. S08-1 0.39 OH686_20775 Two-component transcriptional response regulator, LuxR family 0.29 OH686_09455 HflC protein low > 80
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_3547 DNA-binding response regulator 0.31 Pf1N1B4_1409 HflC protein — —
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4409 DNA-binding response regulator 0.31 PfGW456L13_151 HflC protein low > 87
Pseudomonas sp. RS175 0.39 PFR28_03323 Transcriptional regulatory protein CpxR 0.28 PFR28_05124 Modulator of FtsH protease HflC low > 88
Rhodospirillum rubrum S1H 0.34 Rru_A3422 Two component Transcriptional regulator, Winged helix family (NCBI) 0.27 Rru_A2202 HflC (NCBI) — —
Dinoroseobacter shibae DFL-12 0.34 Dshi_0212 two component transcriptional regulator, winged helix family (RefSeq) 0.27 Dshi_2735 HflC protein (RefSeq) low > 64

Not shown: 0 genomes with orthologs for HER17_RS00665 only; 46 genomes with orthologs for HER17_RS02600 only