Conservation of cofitness between HER17_RS00965 and HER17_RS01160 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS01160 UDP-N-acetyl-D-mannosamine dehydrogenase 0.91 7
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.71 DZA65_RS21240 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.71 HGI48_RS20195 UDP-N-acetyl-D-mannosamine dehydrogenase low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.73 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.82 HEPCGN_13275 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.81 86
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.82 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) low > 76
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.82 NIAGMN_12320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.82 JDDGAC_18190 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.96 3
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.82 MCAODC_05070 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.94 1
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.82 BNILDI_04825 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.86 42
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.81 EX28DRAFT_4457 nucleotide sugar dehydrogenase low > 76
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.82 EFB2_04852 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.82 KEDOAH_13585 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.81 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase low > 85
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.82 OKFHMN_14565 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.87 26
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.82 ECD_03665 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase low > 61
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.82 ECOLIN_RS21740 UDP-N-acetyl-D-mannosamine dehydrogenase 0.65 12
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.82 NOLOHH_06700 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.82 OHPLBJKB_04267 UDP-N-acetyl-D-mannosamine dehydrogenase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.79 GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.80 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase 0.63 5
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.85 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.79 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase low > 89
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.77 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase low > 76
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.76 LU632_RS24235 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00775 HTH-type transcriptional repressor FabR 0.64 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase low > 62
Shewanella amazonensis SB2B 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.18 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.19 SO3190 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1831 transcriptional regulator, TetR family 0.66 B158DRAFT_2353 nucleotide sugar dehydrogenase low > 40
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.65 HP15_2381 UDP-glucose 6-dehydrogenase low > 73
Acinetobacter radioresistens SK82 0.35 MPMX26_01029 HTH-type transcriptional repressor FabR 0.20 MPMX26_00050 UDP-N-acetyl-D-glucosamine 6-dehydrogenase low > 36
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4923.1 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.19 Xcc-8004.2607.1 Polysaccharide biosynthetic protein low > 74
Pseudomonas sp. S08-1 0.31 OH686_16690 Transcriptional regulator, AcrR family 0.71 OH686_14390 UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Lysobacter sp. OAE881 0.28 ABIE51_RS00935 HTH-type transcriptional repressor FabR 0.18 ABIE51_RS07835 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB low > 62
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.73 PfGW456L13_3996 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 87
Pseudomonas sp. RS175 0.27 PFR28_05164 HTH-type transcriptional repressor FabR 0.71 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.19 Pf6N2E2_2513 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 103
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_08445 TetR family transcriptional regulator 0.24 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase low > 104
Paraburkholderia graminis OAS925 0.22 ABIE53_002363 AcrR family transcriptional regulator 0.17 ABIE53_000508 UDP-N-acetyl-D-galactosamine dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS11410 TetR family transcriptional regulator 0.66 BPHYT_RS29845 UDP-N-acetyl-D-mannosamine dehydrogenase — —

Not shown: 11 genomes with orthologs for HER17_RS00965 only; 38 genomes with orthologs for HER17_RS01160 only