Conservation of cofitness between HER17_RS00965 and HER17_RS01155 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS01155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.91 8
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.75 DZA65_RS21245 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.75 HGI48_RS20200 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.76 DDA3937_RS20055 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 74
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.77 JDDGAC_18195 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.95 13
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.77 EFB2_04853 UDP-N-acetylglucosamine 2-epimerase low > 86
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.77 OKFHMN_14570 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 80
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.76 HEPCGN_13280 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 87
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.77 NIAGMN_12325 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.77 ECD_03664 UDP-N-acetyl glucosamine-2-epimerase low > 61
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.75 MPMX20_04487 UDP-N-acetylglucosamine 2-epimerase low > 85
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.77 BNILDI_04820 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.89 22
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.77 b3786 rffE UDP-N-acetyl glucosamine-2-epimerase (NCBI) low > 76
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.77 ECOLIN_RS21735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.57 43
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.77 MCAODC_05075 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 87
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.79 EX28DRAFT_4456 UDP-N-acetylglucosamine 2-epimerase low > 76
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.77 KEDOAH_13580 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.77 OHPLBJKB_04268 UDP-N-acetylglucosamine 2-epimerase 0.79 33
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.77 NOLOHH_06705 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 75
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.80 BWI76_RS01090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.75 GFF2887 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 78
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.85 IAI46_00600 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 86
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.79 EX31_RS15065 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 89
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.81 LU632_RS24240 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 74
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.79 IAI47_18510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00775 HTH-type transcriptional repressor FabR 0.72 CSW01_04705 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.50 23
Shewanella amazonensis SB2B 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.73 Sama_2261 UDP-N-acetylglucosamine 2-epimerase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1831 transcriptional regulator, TetR family 0.69 B158DRAFT_2351 UDP-N-acetylglucosamine 2-epimerase low > 40
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.70 HP15_2382 UDP-N-acetylglucosamine 2-epimerase low > 73
Acinetobacter radioresistens SK82 0.35 MPMX26_01029 HTH-type transcriptional repressor FabR 0.41 MPMX26_00920 UDP-N-acetylglucosamine 2-epimerase low > 36
Pseudomonas sp. S08-1 0.31 OH686_16690 Transcriptional regulator, AcrR family 0.70 OH686_14385 UDP-N-acetylglucosamine 2-epimerase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4450 transcriptional regulator, TetR family 0.57 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4450 transcriptional regulator, TetR family 0.57 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase low > 86
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.68 PfGW456L13_3995 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 87
Pseudomonas putida KT2440 0.27 PP_4859 Transcriptional regulator, TetR family 0.69 PP_1811 UDP-N-acetylglucosamine-2-epimerase low > 96
Pseudomonas sp. RS175 0.27 PFR28_05164 HTH-type transcriptional repressor FabR 0.69 PFR28_00916 UDP-N-acetylglucosamine 2-epimerase low > 88
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_13415 TetR family transcriptional regulator 0.48 AO353_01990 UDP-N-acetylglucosamine 2-epimerase low > 101
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_08445 TetR family transcriptional regulator 0.53 AO356_25630 UDP-N-acetylglucosamine 2-epimerase low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.53 Pf6N2E2_201 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 103
Pseudomonas simiae WCS417 0.27 PS417_02720 TetR family transcriptional regulator 0.15 PS417_08175 UDP-N-acetylglucosamine 2-epimerase — —
Pseudomonas fluorescens SBW25 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.16 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.16 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 109
Paraburkholderia graminis OAS925 0.22 ABIE53_002363 AcrR family transcriptional regulator 0.49 ABIE53_001712 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS11410 TetR family transcriptional regulator 0.49 BPHYT_RS21460 UDP-N-acetylglucosamine 2-epimerase low > 109

Not shown: 7 genomes with orthologs for HER17_RS00965 only; 28 genomes with orthologs for HER17_RS01155 only