Conservation of cofitness between HER17_RS10870 and HER17_RS00910 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS00910 cystathionine gamma-synthase 0.95 10
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.92 DDA3937_RS00950 cystathionine gamma-synthase low > 74
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.92 HGI48_RS20425 cystathionine gamma-synthase low > 71
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.61 44
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.84 IAI46_24540 cystathionine gamma-synthase — —
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.77 EX31_RS14215 cystathionine gamma-synthase 0.96 14
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.87 BWI76_RS00785 cystathionine gamma-synthase — —
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.85 LU632_RS19640 metB cystathionine gamma-synthase — —
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.89 1
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.87 MPMX20_04531 Cystathionine gamma-synthase — —
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.87 EFB2_04679 Cystathionine gamma-synthase — —
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.87 b3939 metB cystathionine gamma-synthase (NCBI) — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.87 JDDGAC_17300 metB cystathionine gamma-synthase — —
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.87 BNILDI_05715 metB cystathionine gamma-synthase — —
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.87 NOLOHH_05820 metB cystathionine gamma-synthase — —
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.87 NIAGMN_11430 metB cystathionine gamma-synthase — —
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.87 OKFHMN_13675 metB cystathionine gamma-synthase — —
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.56 7
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) — —
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.87 KEDOAH_14485 metB cystathionine gamma-synthase — —
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.87 MCAODC_04175 metB cystathionine gamma-synthase — —
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent — —
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.79 IAI47_00880 cystathionine gamma-synthase 0.70 19
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase — —
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.82 37
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) — —
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) low > 40
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.55 OKGIIK_01515 metB cystathionine gamma-synthase low > 52
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.84 3
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.57 LRK55_RS05085 cystathionine gamma-synthase low > 63
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.97 8
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.98 8
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.55 Xcc-8004.1596.1 hypothetical protein 0.78 4

Not shown: 22 genomes with orthologs for HER17_RS10870 only; 4 genomes with orthologs for HER17_RS00910 only