Conservation of cofitness between HER17_RS04235 and HER17_RS00910 in Pectobacterium carotovorum WPP14

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04235 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 1.0 HER17_RS00910 cystathionine gamma-synthase 0.90 19
Dickeya dadantii 3937 0.80 DDA3937_RS16945 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.90 15
Dickeya dianthicola 67-19 0.79 HGI48_RS17015 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.89 10
Dickeya dianthicola ME23 0.79 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.78 20
Serratia liquefaciens MT49 0.78 IAI46_03685 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 IAI46_24540 cystathionine gamma-synthase low > 86
Pantoea sp. MT58 0.78 IAI47_04150 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.79 IAI47_00880 cystathionine gamma-synthase 0.89 14
Rahnella sp. WP5 0.77 EX31_RS07905 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.77 EX31_RS14215 cystathionine gamma-synthase 0.95 13
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2853 sulfite reductase [NADPH] flavoprotein, alpha-component 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.83 15
Escherichia coli ECRC62 0.75 BNILDI_10735 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.97 32
Escherichia coli ECOR27 0.75 NOLOHH_12185 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.92 37
Escherichia coli BW25113 0.75 b2764 cysJ sulfite reductase, alpha subunit, flavoprotein (NCBI) 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.90 37
Escherichia coli BL21 0.75 ECD_02609 sulfite reductase, alpha subunit, flavoprotein 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.73 42
Enterobacter sp. TBS_079 0.75 MPMX20_03643 Sulfite reductase [NADPH] flavoprotein alpha-component 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.61 17
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00969 Sulfite reductase [NADPH] flavoprotein alpha-component 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli Nissle 1917 0.75 ECOLIN_RS15410 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.86 20
Escherichia fergusonii Becca 0.75 EFB2_01153 Sulfite reductase [NADPH] flavoprotein alpha-component 0.87 EFB2_04679 Cystathionine gamma-synthase low > 86
Escherichia coli ECOR38 0.75 HEPCGN_19095 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.92 53
Klebsiella michiganensis M5al 0.74 BWI76_RS22765 sulfite reductase subunit alpha 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.86 9
Escherichia coli ECRC100 0.74 OKFHMN_20370 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.99 7
Escherichia coli ECRC98 0.74 JDDGAC_24035 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.85 18
Escherichia coli ECRC101 0.74 MCAODC_10895 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.65 70
Escherichia coli ECRC99 0.74 KEDOAH_07755 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 KEDOAH_14485 metB cystathionine gamma-synthase — —
Escherichia coli ECRC102 0.74 NIAGMN_18140 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 NIAGMN_11430 metB cystathionine gamma-synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4820 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) low > 78
Erwinia tracheiphila SCR3 0.73 LU632_RS06400 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.85 24
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_02010 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase low > 62
Shewanella amazonensis SB2B 0.49 Sama_2839 sulfite reductase subunit alpha (RefSeq) 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.97 14
Shewanella oneidensis MR-1 0.49 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component (NCBI ptt file) 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.92 38
Shewanella loihica PV-4 0.49 Shew_0665 sulfite reductase (NADPH) flavoprotein, alpha chain (RefSeq) 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.89 44
Shewanella sp. ANA-3 0.48 Shewana3_0855 sulfite reductase (NADPH) alpha subunit (RefSeq) 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.91 31
Lysobacter sp. OAE881 0.43 ABIE51_RS15825 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.58 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase 0.97 21
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_05960 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.55 OKGIIK_01515 metB cystathionine gamma-synthase low > 52
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS05905 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.55 ABZR86_RS19030 cystathionine gamma-synthase 0.96 10
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS00930 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.56 LRK54_RS05305 cystathionine gamma-synthase 0.63 1
Rhodanobacter denitrificans MT42 0.37 LRK55_RS00705 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.57 LRK55_RS05085 cystathionine gamma-synthase low > 63
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2160 sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2) 0.60 B158DRAFT_2459 cystathionine gamma-synthase (EC 2.5.1.48) low > 40
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1258.1 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.55 Xcc-8004.1596.1 hypothetical protein 0.87 13

Not shown: 6 genomes with orthologs for HER17_RS04235 only; 5 genomes with orthologs for HER17_RS00910 only