Conservation of cofitness between HEPCGN_02880 and HEPCGN_07710 in Escherichia coli ECOR38

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 HEPCGN_07710 rpmE2-1 type B 50S ribosomal protein L31 0.57 18
Escherichia coli ECOR27 0.99 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.98 NOLOHH_01965 rpmE2-1 type B 50S ribosomal protein L31 low > 75
Escherichia coli BL21 0.99 ECD_01981 multidrug efflux system, subunit C 0.98 ECD_00255 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein low > 61
Escherichia coli ECRC62 0.99 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 BNILDI_00085 rpmE2-1 type B 50S ribosomal protein L31 low > 75
Escherichia coli ECRC100 0.99 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_09190 rpmE2-1 type B 50S ribosomal protein L31 low > 80
Escherichia coli ECRC98 0.99 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 JDDGAC_12830 rpmE2-1 type B 50S ribosomal protein L31 low > 86
Escherichia coli ECRC99 0.99 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_18760 rpmE2-1 type B 50S ribosomal protein L31 — —
Escherichia coli ECRC101 0.99 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_28405 rpmE2-1 type B 50S ribosomal protein L31 low > 87
Escherichia coli ECRC102 0.99 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_07245 rpmE2-1 type B 50S ribosomal protein L31 — —
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.98 b0296 ykgM 50S ribosomal protein L31 (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.98 ECOLIN_RS01925 type B 50S ribosomal protein L31 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 1.00 OHPLBJKB_03385 50S ribosomal protein L31 type B low > 73
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 1.00 EFB2_03748 50S ribosomal protein L31 type B low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.77 EX28DRAFT_2504 ribosomal protein L31 low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.77 MPMX20_01056 50S ribosomal protein L31 type B low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.76 GFF4373 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.75 BWI76_RS06735 50S ribosomal protein L31 low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.69 IAI46_05180 type B 50S ribosomal protein L31 low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.68 HER17_RS15745 type B 50S ribosomal protein L31 low > 75
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.69 IAI47_14520 type B 50S ribosomal protein L31 low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.65 HGI48_RS05785 type B 50S ribosomal protein L31 low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.65 DDA3937_RS05730 type B 50S ribosomal protein L31 low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.65 DZA65_RS06110 type B 50S ribosomal protein L31 low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.62 LU632_RS18190 type B 50S ribosomal protein L31 low > 74
Ralstonia solanacearum PSI07 0.63 RPSI07_RS05520 nodulation protein 0.42 RPSI07_RS18265 50S ribosomal protein L31 type B — —
Ralstonia solanacearum GMI1000 0.63 RS_RS22920 nodulation protein 0.43 RS_RS05925 50S ribosomal protein L31 type B — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS18115 nodulation protein 0.42 RALBFv3_RS15110 50S ribosomal protein L31 type B — —
Ralstonia solanacearum UW163 0.63 UW163_RS21015 nodulation protein 0.42 UW163_RS12580 50S ribosomal protein L31 type B — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.45 ABZR87_RS10740 type B 50S ribosomal protein L31 — —
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS07655 nodulation protein 0.46 HSERO_RS04310 50S ribosomal protein L31 — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3620 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.36 Ac3H11_465 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent — —
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2484 Acriflavin resistance protein 0.61 Psyr_3920 LSU ribosomal protein L31P low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2484 Acriflavin resistance protein 0.61 Psyr_3920 LSU ribosomal protein L31P low > 86
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.55 PFLU_RS05495 type B 50S ribosomal protein L31 low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.55 PFLU_RS05495 type B 50S ribosomal protein L31 low > 109
Rahnella sp. WP5 0.53 EX31_RS13375 MMPL family transporter 0.71 EX31_RS22465 type B 50S ribosomal protein L31 low > 89
Castellaniella sp019104865 MT123 0.52 ABCV34_RS14625 efflux RND transporter permease subunit 0.40 ABCV34_RS00905 type B 50S ribosomal protein L31 — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS29845 efflux RND transporter permease subunit 0.43 QEN71_RS22325 type B 50S ribosomal protein L31 — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein 0.34 GFF4238 LSU ribosomal protein L31p — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06491 multidrug efflux pump 0.44 H281DRAFT_00824 LSU ribosomal protein L31P — —
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS07780 nodulation protein 0.43 BPHYT_RS09025 50S ribosomal protein L31 type B — —
Variovorax sp. OAS795 0.39 ABID97_RS06490 efflux RND transporter permease subunit 0.30 ABID97_RS14640 type B 50S ribosomal protein L31 — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13040 acriflavin resistance protein 0.39 CA264_19900 50S ribosomal protein L31 — —
Acinetobacter radioresistens SK82 0.23 MPMX26_02516 Multidrug resistance protein MdtC 0.60 MPMX26_00304 50S ribosomal protein L31 type B low > 36
Fusobacterium nucleatum SB010 0.16 HUW76_07660 efflux RND transporter permease subunit 0.34 HUW76_07620 type B 50S ribosomal protein L31 low > 35

Not shown: 19 genomes with orthologs for HEPCGN_02880 only; 19 genomes with orthologs for HEPCGN_07710 only