Conservation of cofitness between PS417_27750 and PS417_03560 in Pseudomonas simiae WCS417

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27750 transcriptional regulator 1.0 PS417_03560 GTP-binding protein 0.22 8
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29425 cupin domain-containing protein 0.98 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29425 cupin domain-containing protein 0.98 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2130 FIG00953403: hypothetical protein 0.97 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF low > 87
Pseudomonas sp. RS175 0.89 PFR28_04408 hypothetical protein 0.96 PFR28_03664 Ribosome-binding ATPase YchF 0.26 70
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_803 FIG00953403: hypothetical protein 0.97 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF low > 87
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_09200 transcriptional regulator 0.97 AO353_14740 GTP-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_12575 transcriptional regulator 0.97 AO356_16450 GTP-binding protein low > 104
Pseudomonas putida KT2440 0.85 PP_5279 conserved protein of unknown function 0.93 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_0226 Protein of unknown function DUF861 0.96 Psyr_0941 Conserved hypothetical protein 92 low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_0226 Protein of unknown function DUF861 0.96 Psyr_0941 Conserved hypothetical protein 92 low > 86
Pseudomonas sp. S08-1 0.81 OH686_13640 Predicted enzyme of the cupin superfamily 0.92 OH686_07965 GTP-binding and nucleic acid-binding protein YchF low > 80
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS32850 transcriptional regulator 0.67 BPHYT_RS17445 GTP-binding protein YchF low > 109
Shewanella sp. ANA-3 0.62 Shewana3_3108 protein of unknown function DUF861, cupin_3 (RefSeq) 0.72 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 73
Shewanella loihica PV-4 0.62 Shew_0964 protein of unknown function DUF861, cupin_3 (RefSeq) 0.69 Shew_2919 translation-associated GTPase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.61 Sama_2651 hypothetical protein (RefSeq) 0.71 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 62
Shewanella oneidensis MR-1 0.60 SO3501 conserved hypothetical protein (NCBI ptt file) 0.72 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) low > 76
Azospirillum sp. SherDot2 0.40 MPMX19_00430 hypothetical protein 0.58 MPMX19_01641 Ribosome-binding ATPase YchF — —
Azospirillum brasilense Sp245 0.39 AZOBR_RS00120 cupin 0.59 AZOBR_RS30645 GTP-binding protein YchF — —
Agrobacterium fabrum C58 0.37 Atu1253 hypothetical protein 0.57 Atu2233 GTP-binding protein — —
Rhizobium sp. OAE497 0.36 ABIE40_RS07040 cupin domain-containing protein 0.58 ABIE40_RS13100 redox-regulated ATPase YchF — —
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS15290 cupin 0.65 RR42_RS18365 GTP-binding protein low > 128
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS11025 cupin 0.63 HSERO_RS20405 GTP-binding protein YchF low > 78
Dinoroseobacter shibae DFL-12 0.32 Dshi_1826 protein of unknown function DUF861 cupin_3 (RefSeq) 0.57 Dshi_0954 GTP-binding protein YchF (RefSeq) — —
Dechlorosoma suillum PS 0.27 Dsui_0795 putative enzyme of the cupin superfamily 0.63 Dsui_1039 GTP-binding protein YchF — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS23585 cupin domain-containing protein 0.65 QEN71_RS27600 redox-regulated ATPase YchF — —

Not shown: 1 genomes with orthologs for PS417_27750 only; 75 genomes with orthologs for PS417_03560 only