Conservation of cofitness between Psest_2133 and Psest_0691 in Pseudomonas stutzeri RCH2

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2133 Uncharacterized protein conserved in bacteria 1.0 Psest_0691 ribonuclease R 0.32 18
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3998 putative exported protein 0.81 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_01045 hypothetical protein 0.80 AO356_08610 exoribonuclease R low > 104
Pseudomonas sp. RS175 0.58 PFR28_02751 Translocation and assembly module subunit TamB 0.81 PFR28_05130 Ribonuclease R low > 88
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_145 putative exported protein 0.80 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R low > 103
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_2602 putative exported protein 0.81 PfGW456L13_144 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_27860 hypothetical protein 0.81 AO353_13200 exoribonuclease R low > 101
Pseudomonas fluorescens SBW25 0.56 PFLU_RS18915 translocation/assembly module TamB 0.80 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS18915 translocation/assembly module TamB 0.80 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2479 Protein of unknown function DUF490 0.81 Psyr_0579 RNAse R low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2479 Protein of unknown function DUF490 0.81 Psyr_0579 RNAse R low > 86
Pseudomonas simiae WCS417 0.56 PS417_16965 hypothetical protein 0.80 PS417_02555 exoribonuclease R low > 88
Pseudomonas putida KT2440 0.54 PP_2893 conserved exported protein of unknown function 0.78 PP_4880 exoribonuclease R low > 96
Marinobacter adhaerens HP15 0.36 HP15_2340 protein containing DUF490 0.49 HP15_622 exoribonuclease R low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF875 Uncharacterized protein YtfN 0.48 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.76 13
Escherichia fergusonii Becca 0.16 EFB2_04308 Translocation and assembly module subunit TamB 0.48 EFB2_04356 Ribonuclease R low > 86
Escherichia coli ECOR27 0.16 NOLOHH_04255 tamB autotransporter assembly complex protein TamB 0.48 NOLOHH_04485 rnr ribonuclease R low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_03812 Translocation and assembly module subunit TamB 0.48 OHPLBJKB_03863 Ribonuclease R low > 73
Escherichia coli ECRC62 0.16 BNILDI_07260 tamB autotransporter assembly complex protein TamB 0.48 BNILDI_07005 rnr ribonuclease R — —
Escherichia coli BL21 0.16 ECD_04092 translocation and assembly module for autotransporter export, inner membrane subunit 0.48 ECD_04046 exoribonuclease R, RNase R low > 60
Enterobacter asburiae PDN3 0.16 EX28DRAFT_3407 Uncharacterized protein conserved in bacteria 0.47 EX28DRAFT_3376 ribonuclease R low > 76
Escherichia coli ECRC102 0.16 NIAGMN_09845 tamB autotransporter assembly complex protein TamB 0.48 NIAGMN_10070 rnr ribonuclease R — —
Escherichia coli ECRC101 0.16 OKFHMN_11995 tamB autotransporter assembly complex protein TamB 0.48 OKFHMN_12220 rnr ribonuclease R — —
Escherichia coli ECRC101 0.16 MCAODC_02510 tamB autotransporter assembly complex protein TamB 0.48 MCAODC_02735 rnr ribonuclease R — —
Escherichia coli ECRC99 0.16 KEDOAH_16160 tamB autotransporter assembly complex protein TamB 0.48 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli ECRC98 0.16 JDDGAC_15635 tamB autotransporter assembly complex protein TamB 0.48 JDDGAC_15860 rnr ribonuclease R — —
Escherichia coli Nissle 1917 0.16 ECOLIN_RS24515 autotransporter assembly complex protein TamB 0.48 ECOLIN_RS24265 ribonuclease R low > 52
Escherichia coli ECOR38 0.16 HEPCGN_10195 tamB autotransporter assembly complex protein TamB 0.48 HEPCGN_10450 rnr ribonuclease R low > 85
Escherichia coli BW25113 0.16 b4221 ytfN hypothetical protein (NCBI) 0.48 b4179 vacB putative enzyme (VIMSS) low > 76
Klebsiella michiganensis M5al 0.16 BWI76_RS02780 translocation and assembly module TamB 0.47 BWI76_RS02575 exoribonuclease R low > 92
Enterobacter sp. TBS_079 0.16 MPMX20_00504 Translocation and assembly module subunit TamB 0.47 MPMX20_00460 Ribonuclease R low > 85
Erwinia tracheiphila SCR3 0.16 LU632_RS02110 translocation/assembly module TamB 0.47 LU632_RS21750 rnr ribonuclease R low > 74
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_12900 DUF490 domain-containing protein 0.46 CSW01_13155 ribonuclease R 0.43 16
Dickeya dianthicola ME23 0.15 DZA65_RS18290 translocation/assembly module TamB 0.46 DZA65_RS18405 ribonuclease R low > 75
Dickeya dianthicola 67-19 0.15 HGI48_RS17210 translocation/assembly module TamB 0.46 HGI48_RS17315 ribonuclease R low > 71
Dickeya dadantii 3937 0.14 DDA3937_RS17155 translocation/assembly module TamB 0.45 DDA3937_RS17260 ribonuclease R low > 74
Shewanella amazonensis SB2B 0.13 Sama_1615 hypothetical protein (RefSeq) 0.44 Sama_3067 exoribonuclease II (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.11 MIT1002_04049 Autotransporter assembly factor TamB 0.45 MIT1002_03606 Ribonuclease R low > 70
Lysobacter sp. OAE881 0.10 ABIE51_RS01230 translocation/assembly module TamB domain-containing protein 0.40 ABIE51_RS07475 ribonuclease R low > 62
Xanthomonas campestris pv. campestris strain 8004 0.09 Xcc-8004.5192.1 hypothetical protein 0.39 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R low > 74

Not shown: 0 genomes with orthologs for Psest_2133 only; 53 genomes with orthologs for Psest_0691 only