Conservation of cofitness between GFF1891 and GFF5509 in Hydrogenophaga sp. GW460-11-11-14-LB1

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1891 FIG011065: hypothetical protein 1.0 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor 0.61 10
Acidovorax sp. GW101-3H11 0.70 Ac3H11_3324 FIG011065: hypothetical protein 0.76 Ac3H11_3230 Gluconate utilization system Gnt-I transcriptional repressor low > 79
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS23970 membrane protein 0.41 HSERO_RS05460 LacI family transcription regulator low > 78
Pseudomonas putida KT2440 0.45 PP_3933 conserved membrane protein of unknown function 0.51 PP_3415 Transcriptional regulator, LacI family low > 96
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_96 FIG011065: hypothetical protein 0.54 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor low > 103
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_28075 hypothetical protein 0.54 AO353_03255 LacI family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_4116 FIG011065: hypothetical protein 0.55 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Dickeya dadantii 3937 0.32 DDA3937_RS14570 TSUP family transporter 0.31 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Azospirillum sp. SherDot2 0.30 MPMX19_00682 putative membrane transporter protein YfcA 0.40 MPMX19_05332 HTH-type transcriptional regulator GntR low > 112
Pantoea sp. MT58 0.29 IAI47_06160 TSUP family transporter 0.28 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Dickeya dianthicola 67-19 0.29 HGI48_RS14520 TSUP family transporter 0.30 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Serratia liquefaciens MT49 0.29 IAI46_18015 TSUP family transporter 0.28 IAI46_23965 gluconate operon transcriptional repressor GntR low > 86
Erwinia tracheiphila SCR3 0.29 LU632_RS07785 sulfite exporter TauE/SafE family protein 0.27 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR low > 74
Dickeya dianthicola ME23 0.29 DZA65_RS15455 TSUP family transporter 0.29 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF1948 Putative membrane protein YfcA 0.27 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Azospirillum brasilense Sp245 0.29 AZOBR_RS10405 membrane protein 0.44 AZOBR_RS15720 LacI family transcription regulator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_01378 putative membrane transporter protein YfcA 0.27 OHPLBJKB_00264 HTH-type transcriptional regulator GntR 0.39 49
Escherichia coli BW25113 0.28 b2327 yfcA conserved inner membrane protein (NCBI) 0.27 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECOR38 0.28 HEPCGN_21830 yfcA putative membrane transporter protein YfcA 0.27 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR 0.54 22
Escherichia coli ECOR27 0.28 NOLOHH_14260 yfcA putative membrane transporter protein YfcA 0.26 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC101 0.28 MCAODC_13665 yfcA putative membrane transporter protein YfcA 0.27 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC99 0.28 KEDOAH_05570 yfcA putative membrane transporter protein YfcA 0.27 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia fergusonii Becca 0.28 EFB2_01531 putative membrane transporter protein YfcA 0.27 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli ECRC98 0.28 JDDGAC_26585 yfcA putative membrane transporter protein YfcA 0.27 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 86
Escherichia coli BL21 0.28 ECD_02252 TauE/TSUP family inner membrane protein 0.26 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli Nissle 1917 0.28 ECOLIN_RS13480 sulfite exporter TauE/SafE family protein 0.27 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC102 0.28 NIAGMN_20400 yfcA putative membrane transporter protein YfcA 0.27 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC100 0.28 OKFHMN_22625 yfcA putative membrane transporter protein YfcA 0.27 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 80
Rhizobium sp. OAE497 0.28 ABIE40_RS11125 TSUP family transporter 0.27 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Pectobacterium carotovorum WPP14 0.28 HER17_RS06945 sulfite exporter TauE/SafE family protein 0.29 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC62 0.28 BNILDI_13180 yfcA putative membrane transporter protein YfcA 0.27 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Enterobacter sp. TBS_079 0.28 MPMX20_03262 putative membrane transporter protein YfcA 0.27 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Enterobacter asburiae PDN3 0.27 EX28DRAFT_0277 Predicted permeases 0.27 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_369 Putative membrane protein YfcA 0.55 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Castellaniella sp019104865 MT123 0.26 ABCV34_RS12215 TSUP family transporter 0.56 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator low > 48
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_09295 hypothetical protein 0.30 CSW01_01485 transcriptional regulator low > 62
Pseudomonas sp. RS175 0.22 PFR28_02189 putative membrane transporter protein YfcA 0.55 PFR28_00593 HTH-type transcriptional regulator GntR low > 88
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_25900 hypothetical protein 0.55 AO356_05065 LacI family transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.21 PS417_12880 membrane protein 0.55 PS417_21990 LacI family transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS13560 TSUP family transporter 0.55 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS13560 TSUP family transporter 0.55 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas stutzeri RCH2 0.21 Psest_2079 Predicted permeases 0.55 Psest_2126 Transcriptional regulators 0.43 3
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_2454 Protein of unknown function DUF81 0.53 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_2454 Protein of unknown function DUF81 0.53 Psyr_3336 transcriptional regulator, LacI family low > 86

Not shown: 27 genomes with orthologs for GFF1891 only; 3 genomes with orthologs for GFF5509 only