Conservation of cofitness between Psest_4246 and Psest_0539 in Pseudomonas stutzeri RCH2

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_4246 type VI secretion protein IcmF 1.0 Psest_0539 Acyl-CoA dehydrogenases 0.44 8
Pseudomonas sp. S08-1 0.71 OH686_12780 T6SS component TssM (IcmF/VasK) 0.86 OH686_08875 Acyl-CoA dehydrogenase low > 80
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2095 IcmF-related protein 0.85 Pf1N1B4_2720 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_09380 type VI secretion protein VasK 0.85 AO353_06340 acyl-CoA dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4310 IcmF-related protein 0.85 Pf6N2E2_5026 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 103
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_12190 type VI secretion protein VasK 0.85 AO356_15445 acyl-CoA dehydrogenase low > 104
Pseudomonas simiae WCS417 0.42 PS417_15265 type VI secretion protein VasK 0.83 PS417_24590 acyl-CoA dehydrogenase low > 88
Pseudomonas sp. RS175 0.20 PFR28_04450 hypothetical protein 0.84 PFR28_03841 Putative acyl-CoA dehydrogenase AidB 0.41 79
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS29600 type VI secretion system membrane subunit TssM 0.83 PFLU_RS26520 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS29600 type VI secretion system membrane subunit TssM 0.83 PFLU_RS26520 acyl-CoA dehydrogenase low > 109
Variovorax sp. OAS795 0.18 ABID97_RS04995 type VI secretion system membrane subunit TssM 0.44 ABID97_RS15780 isovaleryl-CoA dehydrogenase low > 91
Agrobacterium fabrum C58 0.17 Atu4332 IcmF family protein 0.36 Atu1310 acyl-CoA dehydrogenase — —
Variovorax sp. SCN45 0.17 GFF6222 T6SS component TssM (IcmF/VasK) 0.44 GFF1351 Acyl-CoA dehydrogenase low > 127
Paraburkholderia graminis OAS925 0.16 ABIE53_003925 type VI secretion system protein ImpL 0.45 ABIE53_000068 putative acyl-CoA dehydrogenase low > 113
Enterobacter asburiae PDN3 0.16 EX28DRAFT_0790 type VI secretion protein IcmF 0.36 EX28DRAFT_3379 Acyl-CoA dehydrogenases low > 76
Enterobacter sp. TBS_079 0.16 MPMX20_02678 hypothetical protein 0.36 MPMX20_00463 Putative acyl-CoA dehydrogenase AidB low > 85
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS03585 type VI secretion protein VasK 0.42 RR42_RS01285 acyl-CoA dehydrogenase low > 128
Pantoea sp. MT58 0.15 IAI47_11680 type VI secretion system membrane subunit TssM 0.36 IAI47_02635 isovaleryl-CoA dehydrogenase low > 76
Marinobacter adhaerens HP15 0.13 HP15_3463 type VI secretion protein IcmF 0.62 HP15_3339 acyl-CoA dehydrogenase domain protein low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_03439 hypothetical protein 0.37 OHPLBJKB_03855 Putative acyl-CoA dehydrogenase AidB low > 73
Escherichia fergusonii Becca 0.13 EFB2_03823 hypothetical protein 0.37 EFB2_04348 Putative acyl-CoA dehydrogenase AidB low > 86
Escherichia coli ECOR27 0.13 NOLOHH_02275 tssM type VI secretion system membrane subunit TssM 0.37 NOLOHH_04440 aidB isovaleryl-CoA dehydrogenase low > 75
Escherichia coli ECRC102 0.13 NIAGMN_07770 tssM type VI secretion system membrane subunit TssM 0.37 NIAGMN_10030 aidB isovaleryl-CoA dehydrogenase — —
Escherichia coli ECRC98 0.13 JDDGAC_13515 tssM type VI secretion system membrane subunit TssM 0.37 JDDGAC_15820 aidB isovaleryl-CoA dehydrogenase 0.70 54
Escherichia coli ECRC101 0.13 MCAODC_00435 tssM type VI secretion system membrane subunit TssM 0.37 MCAODC_02695 aidB isovaleryl-CoA dehydrogenase low > 87
Escherichia coli ECRC100 0.13 OKFHMN_09920 tssM type VI secretion system membrane subunit TssM 0.37 OKFHMN_12180 aidB isovaleryl-CoA dehydrogenase low > 80
Escherichia coli ECRC99 0.13 KEDOAH_18235 tssM type VI secretion system membrane subunit TssM 0.37 KEDOAH_15975 aidB isovaleryl-CoA dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS13865 type VI secretion system membrane subunit TssM 0.42 ABZR87_RS04770 acyl-CoA dehydrogenase family protein low > 80
Pseudomonas putida KT2440 0.12 PP_2627 conserved membrane protein of unknown function 0.79 PP_4780 putative Acyl-CoA dehydrogenase low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.12 GFF4068 IcmF-related protein 0.35 GFF841 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 78
Paraburkholderia sabiae LMG 24235 0.12 QEN71_RS34515 type VI secretion system membrane subunit TssM 0.45 QEN71_RS28760 isovaleryl-CoA dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.12 BPHYT_RS04540 type VI secretion protein VasK 0.47 BPHYT_RS18740 acyl-CoA dehydrogenase low > 109
Herbaspirillum seropedicae SmR1 0.10 HSERO_RS03785 type VI secretion protein VasK 0.45 HSERO_RS04905 acyl-CoA dehydrogenase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.10 H281DRAFT_05373 type VI secretion system protein ImpL 0.46 H281DRAFT_05793 putative acyl-CoA dehydrogenase low > 103

Not shown: 7 genomes with orthologs for Psest_4246 only; 29 genomes with orthologs for Psest_0539 only