Conservation of cofitness between Psest_2133 and Psest_0516 in Pseudomonas stutzeri RCH2

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2133 Uncharacterized protein conserved in bacteria 1.0 Psest_0516 D-alanyl-D-alanine carboxypeptidase 0.40 3
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3998 putative exported protein 0.79 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_01045 hypothetical protein 0.79 AO356_15330 D-alanyl-D-alanine carboxypeptidase low > 104
Pseudomonas sp. RS175 0.58 PFR28_02751 Translocation and assembly module subunit TamB 0.80 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC low > 88
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_145 putative exported protein 0.79 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 103
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_2602 putative exported protein 0.79 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_27860 hypothetical protein 0.78 AO353_06455 D-alanyl-D-alanine carboxypeptidase 0.29 32
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS18915 translocation/assembly module TamB 0.79 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas fluorescens SBW25 0.56 PFLU_RS18915 translocation/assembly module TamB 0.79 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2479 Protein of unknown function DUF490 0.79 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2479 Protein of unknown function DUF490 0.79 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas simiae WCS417 0.56 PS417_16965 hypothetical protein 0.79 PS417_24705 D-alanyl-D-alanine carboxypeptidase low > 88
Pseudomonas putida KT2440 0.54 PP_2893 conserved exported protein of unknown function 0.78 PP_4803 D-alanyl-D-alanine carboxypeptidase low > 96
Marinobacter adhaerens HP15 0.36 HP15_2340 protein containing DUF490 0.55 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF875 Uncharacterized protein YtfN 0.41 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 78
Escherichia fergusonii Becca 0.16 EFB2_04308 Translocation and assembly module subunit TamB 0.42 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_03812 Translocation and assembly module subunit TamB 0.42 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC low > 73
Escherichia coli ECRC62 0.16 BNILDI_07260 tamB autotransporter assembly complex protein TamB 0.42 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli BL21 0.16 ECD_04092 translocation and assembly module for autotransporter export, inner membrane subunit 0.42 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a low > 60
Escherichia coli ECOR27 0.16 NOLOHH_04255 tamB autotransporter assembly complex protein TamB 0.42 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 57
Enterobacter asburiae PDN3 0.16 EX28DRAFT_3407 Uncharacterized protein conserved in bacteria 0.41 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase low > 76
Escherichia coli ECRC101 0.16 MCAODC_02510 tamB autotransporter assembly complex protein TamB 0.42 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli Nissle 1917 0.16 ECOLIN_RS24515 autotransporter assembly complex protein TamB 0.42 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC98 0.16 JDDGAC_15635 tamB autotransporter assembly complex protein TamB 0.42 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC102 0.16 NIAGMN_09845 tamB autotransporter assembly complex protein TamB 0.42 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC99 0.16 KEDOAH_16160 tamB autotransporter assembly complex protein TamB 0.42 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC101 0.16 OKFHMN_11995 tamB autotransporter assembly complex protein TamB 0.42 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli BW25113 0.16 b4221 ytfN hypothetical protein (NCBI) 0.42 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) low > 76
Escherichia coli ECOR38 0.16 HEPCGN_10195 tamB autotransporter assembly complex protein TamB 0.42 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 85
Klebsiella michiganensis M5al 0.16 BWI76_RS02780 translocation and assembly module TamB 0.44 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase low > 92
Enterobacter sp. TBS_079 0.16 MPMX20_00504 Translocation and assembly module subunit TamB 0.41 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC low > 85
Erwinia tracheiphila SCR3 0.16 LU632_RS02110 translocation/assembly module TamB 0.42 LU632_RS16390 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 74
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_12900 DUF490 domain-containing protein 0.46 CSW01_04845 D-alanyl-D-alanine carboxypeptidase low > 62
Dickeya dianthicola ME23 0.15 DZA65_RS18290 translocation/assembly module TamB 0.42 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase low > 75
Dickeya dianthicola 67-19 0.15 HGI48_RS17210 translocation/assembly module TamB 0.43 HGI48_RS09435 serine hydrolase low > 71
Dickeya dadantii 3937 0.14 DDA3937_RS17155 translocation/assembly module TamB 0.42 DDA3937_RS09420 serine hydrolase low > 74
Shewanella amazonensis SB2B 0.13 Sama_1615 hypothetical protein (RefSeq) 0.43 Sama_2592 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) — —
Alteromonas macleodii MIT1002 0.11 MIT1002_04049 Autotransporter assembly factor TamB 0.46 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor — —
Lysobacter sp. OAE881 0.10 ABIE51_RS01230 translocation/assembly module TamB domain-containing protein 0.46 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein 0.70 54
Xanthomonas campestris pv. campestris strain 8004 0.09 Xcc-8004.5192.1 hypothetical protein 0.44 Xcc-8004.907.1 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 74

Not shown: 0 genomes with orthologs for Psest_2133 only; 43 genomes with orthologs for Psest_0516 only