Conservation of cofitness between PS417_26370 and PS417_24230 in Pseudomonas simiae WCS417

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26370 RNA helicase 1.0 PS417_24230 ATP-dependent protease 0.36 20
Pseudomonas fluorescens SBW25 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 1.00 PFLU_RS26150 ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 1.00 PFLU_RS26150 ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_13770 ATP-dependent RNA helicase 0.94 AO356_15765 ATP-dependent protease low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA 0.93 Pf6N2E2_5093 ATP-dependent protease La (EC 3.4.21.53) Type II low > 103
Pseudomonas sp. RS175 0.94 PFR28_04172 ATP-dependent RNA helicase DbpA 0.93 PFR28_03779 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2412 ATP-dependent 23S rRNA helicase DbpA 0.76 Pf1N1B4_2787 ATP-dependent protease La (EC 3.4.21.53) Type II low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_1078 ATP-dependent 23S rRNA helicase DbpA 0.94 PfGW456L13_1459 ATP-dependent protease La (EC 3.4.21.53) Type II low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_07850 ATP-dependent RNA helicase 0.94 AO353_14055 ATP-dependent protease low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.89 Psyr_4259 ATP-dependent protease, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.89 Psyr_4259 ATP-dependent protease, putative low > 86
Pseudomonas putida KT2440 0.85 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA 0.86 PP_0680 ATP-dependent protease-like protein low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_0344 Superfamily II DNA and RNA helicases 0.84 Psest_3396 Predicted ATP-dependent protease low > 67
Pseudomonas sp. S08-1 0.74 OH686_14770 ATP-dependent 23S rRNA helicase DbpA 0.79 OH686_16260 ATP-dependent protease La Type II 0.45 13
Marinobacter adhaerens HP15 0.59 HP15_1329 DEAD/DEAH box helicase domain protein 0.35 HP15_1352 peptidase S16, lon domain protein low > 73
Dechlorosoma suillum PS 0.57 Dsui_2946 DNA/RNA helicase, superfamily II 0.35 Dsui_2223 putative ATP-dependent protease low > 51
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4671 ATP-dependent 23S rRNA helicase DbpA 0.23 Ac3H11_106 ATP-dependent protease La (EC 3.4.21.53) Type II low > 79
Shewanella amazonensis SB2B 0.53 Sama_0752 ATP-dependent RNA helicase DbpA (RefSeq) 0.30 Sama_2406 ATP-dependent protease, putative (RefSeq) low > 62
Shewanella sp. ANA-3 0.53 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) 0.31 Shewana3_1160 ATP-dependent protease, putative (RefSeq) low > 73
Shewanella oneidensis MR-1 0.53 SO0897 dbpA ATP-dependent RNA helicase DbpA (NCBI ptt file) 0.31 SO3391 ATP-dependent protease, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.53 Shew_0598 ATP-dependent RNA helicase DbpA (RefSeq) 0.32 Shew_1976 putative ATP-dependent protease La-relatedprotein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12980 ATP-dependent RNA helicase DbpA 0.31 CSW01_18990 ATP-dependent protease low > 62
Alteromonas macleodii MIT1002 0.43 MIT1002_03748 ATP-independent RNA helicase DbpA 0.49 MIT1002_01859 Lon protease — —

Not shown: 45 genomes with orthologs for PS417_26370 only; 4 genomes with orthologs for PS417_24230 only