Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_17550 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 1.0 | PS417_21070 | | aconitate hydratase | 0.46 | 4 |
Pseudomonas fluorescens SBW25 | 1.00 | PFLU_RS19360 | | alpha-ketoacid dehydrogenase subunit beta | 0.99 | PFLU_RS22680 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS19360 | | alpha-ketoacid dehydrogenase subunit beta | 0.99 | PFLU_RS22680 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | 0.58 | 7 |
Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_26640 | | 2-oxoisovalerate dehydrogenase | 0.94 | AO353_00890 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | 0.54 | 8 |
Pseudomonas fluorescens FW300-N2C3 | 0.94 | AO356_22985 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.93 | AO356_20875 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | 0.49 | 16 |
Pseudomonas sp. RS175 | 0.94 | PFR28_02446 | | 2-oxoisovalerate dehydrogenase subunit beta | 0.92 | PFR28_02925 | | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) | 0.67 | 12 |
Pseudomonas fluorescens FW300-N2E2 | 0.94 | Pf6N2E2_480 | | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) | 0.93 | Pf6N2E2_6063 | | 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) | 0.46 | 21 |
Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_4479 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | 0.95 | Pf1N1B4_3821 | | 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) | 0.41 | 10 |
Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_3541 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.94 | PfGW456L13_4116 | | 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) | 0.88 | 9 |
Pseudomonas putida KT2440 | 0.89 | PP_4402 | | branched-chain alpha-keto acid dehydrogenase complex, beta subunit | 0.89 | PP_2336 | | aconitate hydratase 1 | 0.23 | 32 |
Alteromonas macleodii MIT1002 | 0.44 | MIT1002_02013 | | 2-oxoisovalerate dehydrogenase subunit beta | 0.83 | MIT1002_03131 | | Aconitate hydratase 1 | — | — |
Shewanella loihica PV-4 | 0.44 | Shew_1926 | | transketolase, central region (RefSeq) | 0.83 | Shew_1822 | | aconitate hydratase (RefSeq) | low | > 60 |
Shewanella sp. ANA-3 | 0.43 | Shewana3_2130 | | transketolase, central region (RefSeq) | 0.84 | Shewana3_3827 | | aconitate hydratase (RefSeq) | low | > 73 |
Shewanella amazonensis SB2B | 0.43 | Sama_1710 | | alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) | 0.83 | Sama_3296 | | aconitate hydratase (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.43 | SO2340 | | alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) | 0.84 | SO0343 | acnA | aconitate hydratase 1 (NCBI ptt file) | low | > 76 |
Lysobacter sp. OAE881 | 0.41 | ABIE51_RS04040 | | alpha-ketoacid dehydrogenase subunit beta | 0.83 | ABIE51_RS09495 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS18445 | | alpha-ketoacid dehydrogenase subunit beta | 0.84 | ABZR86_RS08435 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | — | — |
Kangiella aquimarina DSM 16071 | 0.40 | B158DRAFT_1476 | | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit | 0.80 | B158DRAFT_1345 | | aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.570.1 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | 0.84 | Xcc-8004.3979.1 | | 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) | 0.44 | 34 |
Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS16525 | | alpha-ketoacid dehydrogenase subunit beta | 0.85 | RPSI07_RS00390 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | low | > 81 |
Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS00945 | | alpha-ketoacid dehydrogenase subunit beta | 0.84 | RALBFv3_RS22830 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | low | > 76 |
Ralstonia solanacearum UW163 | 0.38 | UW163_RS14255 | | alpha-ketoacid dehydrogenase subunit beta | 0.84 | UW163_RS23450 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | — | — |
Ralstonia solanacearum GMI1000 | 0.37 | RS_RS09075 | | alpha-ketoacid dehydrogenase subunit beta | 0.85 | RS_RS17730 | | Fe/S-dependent 2-methylisocitrate dehydratase AcnD | low | > 80 |
Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS33050 | | 2-oxoisovalerate dehydrogenase | 0.85 | RR42_RS11270 | | aconitate hydratase | low | > 128 |
Not shown: 11 genomes with orthologs for PS417_17550 only; 24 genomes with orthologs for PS417_21070 only