Conservation of cofitness between PS417_17550 and PS417_21070 in Pseudomonas simiae WCS417

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 1.0 PS417_21070 aconitate hydratase 0.46 4
Pseudomonas fluorescens SBW25 1.00 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.99 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.99 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.58 7
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_26640 2-oxoisovalerate dehydrogenase 0.94 AO353_00890 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.54 8
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_22985 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.93 AO356_20875 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.49 16
Pseudomonas sp. RS175 0.94 PFR28_02446 2-oxoisovalerate dehydrogenase subunit beta 0.92 PFR28_02925 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) 0.67 12
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) 0.93 Pf6N2E2_6063 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.46 21
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4479 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.95 Pf1N1B4_3821 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.41 10
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_3541 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.94 PfGW456L13_4116 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.88 9
Pseudomonas putida KT2440 0.89 PP_4402 branched-chain alpha-keto acid dehydrogenase complex, beta subunit 0.89 PP_2336 aconitate hydratase 1 0.23 32
Alteromonas macleodii MIT1002 0.44 MIT1002_02013 2-oxoisovalerate dehydrogenase subunit beta 0.83 MIT1002_03131 Aconitate hydratase 1
Shewanella loihica PV-4 0.44 Shew_1926 transketolase, central region (RefSeq) 0.83 Shew_1822 aconitate hydratase (RefSeq) low > 60
Shewanella sp. ANA-3 0.43 Shewana3_2130 transketolase, central region (RefSeq) 0.84 Shewana3_3827 aconitate hydratase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.43 Sama_1710 alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) 0.83 Sama_3296 aconitate hydratase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.43 SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) 0.84 SO0343 acnA aconitate hydratase 1 (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.41 ABIE51_RS04040 alpha-ketoacid dehydrogenase subunit beta 0.83 ABIE51_RS09495 Fe/S-dependent 2-methylisocitrate dehydratase AcnD
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS18445 alpha-ketoacid dehydrogenase subunit beta 0.84 ABZR86_RS08435 Fe/S-dependent 2-methylisocitrate dehydratase AcnD
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_1476 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 0.80 B158DRAFT_1345 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.570.1 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.84 Xcc-8004.3979.1 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.44 34
Ralstonia solanacearum PSI07 0.38 RPSI07_RS16525 alpha-ketoacid dehydrogenase subunit beta 0.85 RPSI07_RS00390 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 81
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS00945 alpha-ketoacid dehydrogenase subunit beta 0.84 RALBFv3_RS22830 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS14255 alpha-ketoacid dehydrogenase subunit beta 0.84 UW163_RS23450 Fe/S-dependent 2-methylisocitrate dehydratase AcnD
Ralstonia solanacearum GMI1000 0.37 RS_RS09075 alpha-ketoacid dehydrogenase subunit beta 0.85 RS_RS17730 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 80
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS33050 2-oxoisovalerate dehydrogenase 0.85 RR42_RS11270 aconitate hydratase low > 128

Not shown: 11 genomes with orthologs for PS417_17550 only; 24 genomes with orthologs for PS417_21070 only