Conservation of cofitness between Psest_0343 and Psest_3964 in Pseudomonas stutzeri RCH2

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0343 hypothetical membrane protein, TIGR01666 1.0 Psest_3964 formate dehydrogenase family accessory protein FdhD 0.44 1
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS28030 TIGR01666 family membrane protein 0.62 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS28030 TIGR01666 family membrane protein 0.62 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD low > 109
Pseudomonas simiae WCS417 0.73 PS417_26380 YccS/YhfK family integral membrane protein 0.62 PS417_01270 iron ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_07860 hypothetical protein 0.64 AO353_11830 formate dehydrogenase family accessory protein FdhD low > 101
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_2410 FIG00956403: hypothetical protein 0.64 Pf1N1B4_1673 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_13760 hypothetical protein 0.62 AO356_10100 formate dehydrogenase family accessory protein FdhD low > 104
Pseudomonas sp. RS175 0.71 PFR28_04174 Inner membrane protein YccS 0.63 PFR28_04882 Sulfur carrier protein FdhD low > 88
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK 0.65 Psyr_4945 Formate dehydrogenase, subunit FdhD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK 0.65 Psyr_4945 Formate dehydrogenase, subunit FdhD low > 86
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1076 FIG00956403: hypothetical protein 0.62 PfGW456L13_408 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Pseudomonas putida KT2440 0.70 PP_4954 conserved membrane protein of unknown function 0.61 PP_0257 protein sulfur transferase low > 96
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4671 FIG00956403: hypothetical protein 0.63 Pf6N2E2_3890 Formate dehydrogenase chain D (EC 1.2.1.2) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.656.1 FIG01209718: hypothetical protein 0.29 Xcc-8004.2194.1 Formate dehydrogenase chain D (EC 1.2.1.2) low > 74
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS20530 YccS family putative transporter 0.26 ABZR86_RS03590 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Serratia liquefaciens MT49 0.35 IAI46_08890 TIGR01666 family membrane protein 0.29 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD low > 86
Rahnella sp. WP5 0.35 EX31_RS18025 TIGR01666 family membrane protein 0.28 EX31_RS05780 formate dehydrogenase accessory sulfurtransferase FdhD low > 89
Pectobacterium carotovorum WPP14 0.34 HER17_RS08435 YccS family putative transporter 0.29 HER17_RS21105 formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Dickeya dadantii 3937 0.34 DDA3937_RS15230 TIGR01666 family membrane protein 0.28 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Dickeya dianthicola ME23 0.34 DZA65_RS16130 TIGR01666 family membrane protein 0.28 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Dickeya dianthicola 67-19 0.34 HGI48_RS15305 TIGR01666 family membrane protein 0.28 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD low > 71
Escherichia coli ECRC62 0.33 BNILDI_19940 yccS Inner membrane protein YccS 0.29 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECRC98 0.33 JDDGAC_08830 yccS Inner membrane protein YccS 0.29 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECRC101 0.33 OKFHMN_05220 yccS Inner membrane protein YccS 0.29 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECRC101 0.33 MCAODC_24610 yccS Inner membrane protein YccS 0.29 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECOR27 0.33 NOLOHH_21775 yccS Inner membrane protein YccS 0.29 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 57
Escherichia coli ECRC102 0.33 NIAGMN_02940 yccS Inner membrane protein YccS 0.29 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECRC99 0.33 KEDOAH_22515 yccS Inner membrane protein YccS 0.29 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECOR38 0.33 HEPCGN_23300 yccS Inner membrane protein YccS 0.29 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 85
Escherichia coli BW25113 0.33 b0960 b0960 orf, hypothetical protein (VIMSS) 0.29 b3895 fdhD formate dehydrogenase accessory protein (NCBI) low > 76
Escherichia coli BL21 0.33 ECD_00964 putative transporter, FUSC superfamily inner membrane protein 0.28 ECD_03780 formate dehydrogenase formation protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_02706 Inner membrane protein YccS 0.29 OHPLBJKB_04155 Sulfur carrier protein FdhD 0.33 48
Escherichia coli Nissle 1917 0.33 ECOLIN_RS05045 YccS family putative transporter 0.29 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia fergusonii Becca 0.33 EFB2_03111 Inner membrane protein YccS 0.29 EFB2_04720 Sulfur carrier protein FdhD low > 86
Klebsiella michiganensis M5al 0.33 BWI76_RS09985 membrane protein 0.28 BWI76_RS00475 sulfurtransferase FdhD low > 92
Enterobacter sp. TBS_079 0.33 MPMX20_01610 Inner membrane protein YccS 0.28 MPMX20_04574 Sulfur carrier protein FdhD low > 85
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1983 TIGR01666 family membrane protein 0.28 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3251 Putative efflux (PET) family inner membrane protein YccS 0.27 GFF2254 Formate dehydrogenase chain D (EC 1.2.1.2) low > 78
Pantoea sp. MT58 0.31 IAI47_12630 TIGR01666 family membrane protein 0.27 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD low > 76
Herbaspirillum seropedicae SmR1 0.11 HSERO_RS10560 membrane protein 0.30 HSERO_RS07435 formate dehydrogenase accessory protein FdhD low > 78
Ralstonia solanacearum PSI07 0.07 RPSI07_RS10705 FUSC family protein 0.28 RPSI07_RS04845 sulfurtransferase FdhD low > 81

Not shown: 11 genomes with orthologs for Psest_0343 only; 12 genomes with orthologs for Psest_3964 only