Conservation of cofitness between PS417_06345 and PS417_19785 in Pseudomonas simiae WCS417

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_06345 pseudouridine synthase 1.0 PS417_19785 flagellar biogenesis protein 0.21 12
Pseudomonas fluorescens SBW25 0.98 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD 0.97 PFLU_RS21755 flagella biosynthesis chaperone FliJ low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD 0.97 PFLU_RS21755 flagella biosynthesis chaperone FliJ low > 109
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_16595 pseudouridine synthase 0.84 AO353_18700 flagellar biogenesis protein low > 101
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4679 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.82 PfGW456L13_4349 Flagellar protein FliJ — —
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3041 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.84 Pf6N2E2_2589 Flagellar protein FliJ low > 103
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3111 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.82 Pf1N1B4_3608 Flagellar protein FliJ — —
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_05905 pseudouridine synthase 0.84 AO356_03815 flagellar biogenesis protein low > 104
Pseudomonas sp. RS175 0.91 PFR28_00423 tRNA pseudouridine synthase D 0.84 PFR28_00836 Flagellar FliJ protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1370 tRNA pseudouridine synthase D, TruD 0.73 Psyr_3453 flagellar protein FliJ, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1370 tRNA pseudouridine synthase D, TruD 0.73 Psyr_3453 flagellar protein FliJ, putative low > 86
Pseudomonas putida KT2440 0.75 PP_1619 tRNA pseudouridine synthase D 0.69 PP_4365 Flagellar protein FliJ low > 96
Pseudomonas stutzeri RCH2 0.73 Psest_2811 Uncharacterized conserved protein 0.49 Psest_1723 flagellar export protein FliJ low > 67
Pseudomonas sp. S08-1 0.72 OH686_18165 tRNA pseudouridine(13) synthase 0.67 OH686_02815 flagellar export protein FliJ low > 80
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_08130 truD tRNA pseudouridine(13) synthase TruD 0.18 OKGIIK_02765 fliJ flagellar export protein FliJ low > 52
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS16640 tRNA pseudouridine(13) synthase TruD 0.22 LRK54_RS13515 flagellar export protein FliJ low > 59
Rhodanobacter denitrificans MT42 0.39 LRK55_RS16365 tRNA pseudouridine(13) synthase TruD 0.22 LRK55_RS13255 flagellar export protein FliJ low > 63
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS06605 tRNA pseudouridine(13) synthase TruD 0.26 ABZR86_RS20190 flagellar export protein FliJ low > 74
Shewanella amazonensis SB2B 0.33 Sama_1040 pseudouridylate synthase (RefSeq) 0.18 Sama_2293 flagellar protein FliJ (RefSeq) low > 62
Dickeya dianthicola ME23 0.32 DZA65_RS18035 tRNA pseudouridine(13) synthase TruD 0.19 DZA65_RS13915 flagella biosynthesis chaperone FliJ low > 75
Dickeya dianthicola 67-19 0.32 HGI48_RS16960 tRNA pseudouridine(13) synthase TruD 0.19 HGI48_RS13430 flagella biosynthesis chaperone FliJ low > 71
Rahnella sp. WP5 0.32 EX31_RS07845 tRNA pseudouridine(13) synthase TruD 0.19 EX31_RS09560 flagella biosynthesis chaperone FliJ low > 89
Dickeya dadantii 3937 0.31 DDA3937_RS16890 tRNA pseudouridine(13) synthase TruD 0.18 DDA3937_RS13385 flagella biosynthesis chaperone FliJ low > 74
Erwinia tracheiphila SCR3 0.30 LU632_RS06460 truD tRNA pseudouridine(13) synthase TruD 0.18 LU632_RS10555 fliJ flagella biosynthesis chaperone FliJ low > 74
Pectobacterium carotovorum WPP14 0.29 HER17_RS04335 tRNA pseudouridine(13) synthase TruD 0.21 HER17_RS08260 flagella biosynthesis chaperone FliJ low > 75
Serratia liquefaciens MT49 0.29 IAI46_03765 tRNA pseudouridine(13) synthase TruD 0.21 IAI46_15860 flagella biosynthesis chaperone FliJ low > 86
Enterobacter asburiae PDN3 0.29 EX28DRAFT_2841 tRNA pseudouridine synthase, TruD family 0.18 EX28DRAFT_0612 flagellar export protein FliJ low > 76
Enterobacter sp. TBS_079 0.29 MPMX20_03631 tRNA pseudouridine synthase D 0.18 MPMX20_02939 Flagellar FliJ protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF4793 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.17 GFF4014 Flagellar protein FliJ low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00988 tRNA pseudouridine synthase D 0.19 OHPLBJKB_01787 Flagellar FliJ protein low > 73
Escherichia coli ECRC62 0.28 BNILDI_10840 truD tRNA pseudouridine(13) synthase TruD 0.19 BNILDI_15115 fliJ flagella biosynthesis chaperone FliJ low > 75
Escherichia coli BW25113 0.28 b2745 truD tRNA pseudouridine synthase D (NCBI) 0.19 b1942 fliJ flagellar biosynthesis chaperone (NCBI) low > 76
Escherichia coli ECRC98 0.28 JDDGAC_24140 truD tRNA pseudouridine(13) synthase TruD 0.19 JDDGAC_00280 fliJ flagella biosynthesis chaperone FliJ — —
Escherichia coli ECRC100 0.28 OKFHMN_20475 truD tRNA pseudouridine(13) synthase TruD 0.19 OKFHMN_25695 fliJ flagella biosynthesis chaperone FliJ low > 80
Escherichia coli ECRC101 0.28 MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD 0.19 MCAODC_19700 fliJ flagella biosynthesis chaperone FliJ low > 87
Escherichia coli ECRC102 0.28 NIAGMN_18245 truD tRNA pseudouridine(13) synthase TruD 0.19 NIAGMN_02360 fliJ flagella biosynthesis chaperone FliJ — —
Escherichia coli ECOR38 0.28 HEPCGN_19655 truD tRNA pseudouridine(13) synthase TruD 0.19 HEPCGN_04055 fliJ flagella biosynthesis chaperone FliJ low > 87
Escherichia coli Nissle 1917 0.28 ECOLIN_RS15350 tRNA pseudouridine(13) synthase TruD 0.19 ECOLIN_RS11080 flagellar export protein FliJ — —
Escherichia coli ECRC99 0.28 KEDOAH_07665 truD tRNA pseudouridine(13) synthase TruD 0.19 KEDOAH_02400 fliJ flagella biosynthesis chaperone FliJ — —
Escherichia fergusonii Becca 0.28 EFB2_01165 tRNA pseudouridine synthase D 0.19 EFB2_02004 Flagellar FliJ protein low > 86
Escherichia coli ECOR27 0.28 NOLOHH_12290 truD tRNA pseudouridine(13) synthase TruD 0.19 NOLOHH_16325 fliJ flagella biosynthesis chaperone FliJ low > 75
Marinobacter adhaerens HP15 0.25 HP15_1278 pseudouridylate synthase 0.17 HP15_2322 flagellar FliJ protein low > 73

Not shown: 11 genomes with orthologs for PS417_06345 only; 9 genomes with orthologs for PS417_19785 only