Conservation of cofitness between PS417_27705 and PS417_19615 in Pseudomonas simiae WCS417

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27705 amino acid dehydrogenase 1.0 PS417_19615 chemotaxis protein CheW 0.28 7
Pseudomonas fluorescens SBW25 0.98 PFLU_RS29380 D-amino acid dehydrogenase 0.99 PFLU_RS21585 chemotaxis protein CheV low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS29380 D-amino acid dehydrogenase 0.99 PFLU_RS21585 chemotaxis protein CheV low > 109
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.97 Pf6N2E2_2415 Chemotaxis protein CheV (EC 2.7.3.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_09155 amino acid dehydrogenase 0.98 AO353_19285 chemotaxis protein CheW low > 101
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.97 PfGW456L13_2280 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.97 Pf1N1B4_229 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_12620 amino acid dehydrogenase 0.97 AO356_02950 chemotaxis protein CheW low > 104
Pseudomonas sp. RS175 0.94 PFR28_04399 D-amino acid dehydrogenase 1 0.97 PFR28_01012 Chemotaxis protein CheV low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_0235 D-amino acid dehydrogenase small subunit 0.91 Psyr_3297 CheW protein low > 86
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_0235 D-amino acid dehydrogenase small subunit 0.91 Psyr_3297 CheW protein low > 86
Pseudomonas putida KT2440 0.90 PP_5270 D-amino-acid:quinone oxidoreductase (deaminating) 0.89 PP_2128 putative CheV-like chemotaxis protein low > 96
Pseudomonas sp. S08-1 0.89 OH686_13685 D-amino acid dehydrogenase 0.86 OH686_21885 Chemotaxis protein CheV low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.84 Psest_1842 Chemotaxis signal transduction protein low > 67
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS08375 D-amino acid dehydrogenase small subunit 0.30 HSERO_RS09765 chemotaxis protein CheV low > 78
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS14790 D-amino acid dehydrogenase 0.30 BPHYT_RS07045 chemotaxis protein CheV low > 109
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS04190 D-amino acid dehydrogenase 0.32 QEN71_RS38230 chemotaxis protein low > 153
Rahnella sp. WP5 0.62 EX31_RS10485 D-amino acid dehydrogenase 0.29 EX31_RS11205 chemotaxis protein CheV low > 89
Enterobacter asburiae PDN3 0.62 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.29 EX28DRAFT_0335 Chemotaxis signal transduction protein low > 76
Enterobacter sp. TBS_079 0.61 MPMX20_02699 D-amino acid dehydrogenase 0.30 MPMX20_03205 Chemotaxis protein CheV low > 85
Pectobacterium carotovorum WPP14 0.61 HER17_RS11170 D-amino acid dehydrogenase 0.29 HER17_RS13880 chemotaxis protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.29 GFF1876 Chemotaxis protein CheV (EC 2.7.3.-) low > 78
Castellaniella sp019104865 MT123 0.56 ABCV34_RS10810 D-amino acid dehydrogenase 0.31 ABCV34_RS04825 chemotaxis protein low > 48
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_04065 D-amino acid dehydrogenase small subunit 0.59 CSW01_10015 chemotaxis protein CheV low > 62
Dechlorosoma suillum PS 0.40 Dsui_0501 glycine/D-amino acid oxidase, deaminating 0.32 Dsui_1718 chemotaxis signal transduction protein — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_832 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.33 Ac3H11_3513 Chemotaxis protein CheV (EC 2.7.3.-) low > 79

Not shown: 48 genomes with orthologs for PS417_27705 only; 5 genomes with orthologs for PS417_19615 only