Conservation of cofitness between Psest_0101 and Psest_0358 in Pseudomonas stutzeri RCH2

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0101 Short-chain alcohol dehydrogenase of unknown specificity 1.0 Psest_0358 Neutral trehalase 0.30 10
Klebsiella michiganensis M5al 0.77 BWI76_RS07595 putative oxidoreductase 0.54 BWI76_RS26700 alpha,alpha-trehalase low > 92
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.4903.1 Oxidoreductase 0.48 Xcc-8004.808.1 Trehalase (EC 3.2.1.28); Periplasmic trehalase precursor (EC 3.2.1.28) low > 74
Pseudomonas sp. RS175 0.59 PFR28_05158 Sulfoacetaldehyde reductase 0.49 PFR28_02340 Periplasmic trehalase low > 88
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3575 Oxidoreductase, short chain dehydrogenase/reductase family 0.49 Pf6N2E2_1643 Trehalase (EC 3.2.1.28); Periplasmic trehalase precursor (EC 3.2.1.28) low > 103
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_08475 hypothetical protein 0.48 AO356_24205 Alpha,alpha-trehalase (EC 3.2.1.28) (from data) low > 104
Escherichia coli Nissle 1917 0.52 ECOLIN_RS08810 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 ECOLIN_RS20130 alpha,alpha-trehalase
Escherichia fergusonii Becca 0.52 EFB2_02417 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 0.53 EFB2_00289 Cytoplasmic trehalase low > 86
Escherichia coli ECRC99 0.51 KEDOAH_27415 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 KEDOAH_11905 treF Cytoplasmic trehalase
Escherichia coli BW25113 0.51 b1539 ydfG L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) 0.53 b3519 treF cytoplasmic trehalase (NCBI) low > 76
Escherichia coli ECRC98 0.51 JDDGAC_03525 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 JDDGAC_19870 treF Cytoplasmic trehalase
Escherichia coli ECRC102 0.51 NIAGMN_25160 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 NIAGMN_14005 treF Cytoplasmic trehalase
Escherichia coli ECOR38 0.51 HEPCGN_26930 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 HEPCGN_15145 treF Cytoplasmic trehalase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_02173 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 0.53 OHPLBJKB_00183 Cytoplasmic trehalase low > 73
Escherichia coli ECOR27 0.51 NOLOHH_18640 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 NOLOHH_08205 treF Cytoplasmic trehalase
Escherichia coli ECRC62 0.51 BNILDI_17130 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 BNILDI_03350 treF Cytoplasmic trehalase
Escherichia coli ECRC101 0.51 OKFHMN_01015 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 OKFHMN_16240 treF Cytoplasmic trehalase
Escherichia coli ECRC101 0.51 MCAODC_16910 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 MCAODC_06755 treF Cytoplasmic trehalase
Escherichia coli BL21 0.51 ECD_01498 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase 0.53 ECD_03367 cytoplasmic trehalase low > 60
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04724 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase 0.47 H281DRAFT_02853 alpha,alpha-trehalase low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF2497 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) 0.53 GFF507 Cytoplasmic trehalase (EC 3.2.1.28) low > 78
Enterobacter sp. TBS_079 0.50 MPMX20_02099 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 0.52 MPMX20_04400 Cytoplasmic trehalase low > 85
Enterobacter asburiae PDN3 0.50 EX28DRAFT_1450 Short-chain alcohol dehydrogenase of unknown specificity 0.53 EX28DRAFT_4060 Neutral trehalase low > 76
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS03720 malonic semialdehyde reductase 0.47 BPHYT_RS26585 trehalase low > 109
Pantoea sp. MT58 0.50 IAI47_09805 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.53 IAI47_03455 alpha,alpha-trehalase TreF low > 76
Erwinia tracheiphila SCR3 0.49 LU632_RS11720 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.45 LU632_RS13980 treA alpha,alpha-trehalase TreA low > 74
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS26240 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.46 QEN71_RS10890 alpha,alpha-trehalase TreA low > 153
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS08960 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.46 ABZR87_RS22845 alpha,alpha-trehalase TreA low > 80
Rahnella sp. WP5 0.48 EX31_RS07075 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.55 EX31_RS01295 alpha,alpha-trehalase TreF low > 89
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_2041 Short-chain alcohol dehydrogenase of unknown specificity 0.41 Ga0059261_0579 Neutral trehalase low > 68
Ralstonia solanacearum PSI07 0.47 RPSI07_RS20325 NAD(P)-dependent oxidoreductase 0.45 RPSI07_RS01115 alpha,alpha-trehalase TreA low > 81
Ralstonia solanacearum GMI1000 0.47 RS_RS03675 NAD(P)-dependent oxidoreductase 0.46 RS_RS18490 periplasmic trehalase low > 80
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS12900 NAD(P)-dependent oxidoreductase 0.46 RALBFv3_RS22055 alpha,alpha-trehalase TreA low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS00665 NAD(P)-dependent oxidoreductase 0.46 UW163_RS22595 alpha,alpha-trehalase TreA
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_00460 NAD(P)-dependent oxidoreductase 0.47 CA264_20675 trehalase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS15830 SDR family NAD(P)-dependent oxidoreductase 0.44 ABZR88_RS05190 alpha,alpha-trehalase TreF low > 71

Not shown: 40 genomes with orthologs for Psest_0101 only; 4 genomes with orthologs for Psest_0358 only