Conservation of cofitness between PS417_15610 and PS417_16535 in Pseudomonas simiae WCS417

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_15610 GDP-mannose pyrophosphatase 1.0 PS417_16535 NUDIX hydrolase 0.20 3
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS17595 GDP-mannose pyrophosphatase 0.96 PFLU_RS18575 NUDIX hydrolase low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS17595 GDP-mannose pyrophosphatase 0.96 PFLU_RS18575 NUDIX hydrolase low > 109
Enterobacter sp. TBS_079 0.65 MPMX20_02285 GDP-mannose pyrophosphatase NudK 0.28 MPMX20_01818 Phosphatase NudJ low > 85
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1179 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.28 EX28DRAFT_1796 ADP-ribose pyrophosphatase low > 76
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS24585 NUDIX hydrolase 0.42 BPHYT_RS03365 NUDIX hydrolase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_02692 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.42 H281DRAFT_04652 ADP-ribose pyrophosphatase YjhB, NUDIX family low > 103
Paraburkholderia graminis OAS925 0.63 ABIE53_006434 nudix-type nucleoside diphosphatase (YffH/AdpP family) 0.42 ABIE53_000811 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) low > 113
Pantoea sp. MT58 0.62 IAI47_09965 NUDIX domain-containing protein 0.28 IAI47_11910 NUDIX hydrolase low > 76
Klebsiella michiganensis M5al 0.62 BWI76_RS19825 DNA mismatch repair protein MutT 0.26 BWI76_RS11320 NUDIX hydrolase — —
Variovorax sp. OAS795 0.61 ABID97_RS01680 GDP-mannose pyrophosphatase 0.37 ABID97_RS04420 NUDIX hydrolase low > 91
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS08520 NUDIX domain-containing protein 0.40 QEN71_RS26735 NUDIX hydrolase low > 153
Dickeya dianthicola ME23 0.60 DZA65_RS10275 NUDIX domain-containing protein 0.27 DZA65_RS11860 NUDIX hydrolase 0.26 71
Dickeya dianthicola 67-19 0.60 HGI48_RS09940 NUDIX domain-containing protein 0.27 HGI48_RS11525 NUDIX hydrolase low > 71
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_2669 GDP-mannose pyrophosphatase YffH 0.85 PfGW456L13_2640 Nudix-like NDP and NTP phosphohydrolase YmfB low > 87
Dickeya dadantii 3937 0.59 DDA3937_RS09935 NUDIX domain-containing protein 0.29 DDA3937_RS11480 NUDIX hydrolase low > 74
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_27560 GDP-mannose pyrophosphatase 0.86 AO353_27700 NUDIX hydrolase low > 101
Serratia liquefaciens MT49 0.57 IAI46_11585 NUDIX domain-containing protein 0.31 IAI46_10445 NUDIX hydrolase low > 86
Rahnella sp. WP5 0.57 EX31_RS22815 GDP-mannose pyrophosphatase NudK 0.30 EX31_RS24580 NUDIX hydrolase low > 89
Pectobacterium carotovorum WPP14 0.56 HER17_RS17390 GDP-mannose pyrophosphatase NudK 0.26 HER17_RS11620 NUDIX hydrolase low > 75
Variovorax sp. SCN45 0.56 GFF5518 Nudix hydrolase family protein KPN_02621 0.42 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ low > 127
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1945.1 GDP-mannose pyrophosphatase YffH 0.53 Xcc-8004.2757.1 Nudix-like NDP and NTP phosphohydrolase YmfB low > 74
Pseudomonas sp. RS175 0.52 PFR28_04570 GDP-mannose pyrophosphatase NudK 0.86 PFR28_02618 Phosphatase NudJ low > 88
Acidovorax sp. GW101-3H11 0.52 Ac3H11_4083 GDP-mannose pyrophosphatase YffH 0.43 Ac3H11_4361 NTP pyrophosphohydrolases including oxidative damage repair enzymes low > 79
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4229 GDP-mannose pyrophosphatase YffH 0.86 Pf6N2E2_287 Nudix-like NDP and NTP phosphohydrolase YmfB low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_11785 GDP-mannose pyrophosphatase 0.86 AO356_22115 NUDIX hydrolase low > 104
Escherichia coli BL21 0.50 ECD_02358 GDP-mannose pyrophosphatase 0.30 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase — —
Escherichia coli ECRC99 0.50 KEDOAH_06235 nudK GDP-mannose pyrophosphatase NudK 0.31 KEDOAH_24835 nudJ phosphatase NudJ — —
Escherichia coli ECRC98 0.50 JDDGAC_25930 nudK GDP-mannose pyrophosphatase NudK 0.31 JDDGAC_06615 nudJ phosphatase NudJ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_01264 GDP-mannose pyrophosphatase NudK 0.31 OHPLBJKB_02534 Phosphatase NudJ low > 73
Escherichia coli Nissle 1917 0.50 ECOLIN_RS14075 GDP-mannose pyrophosphatase NudK 0.31 ECOLIN_RS06630 phosphatase NudJ — —
Escherichia coli ECRC101 0.50 OKFHMN_21985 nudK GDP-mannose pyrophosphatase NudK 0.31 OKFHMN_00750 nudJ phosphatase NudJ — —
Escherichia coli BW25113 0.50 b2467 yffH predicted NUDIX hydrolase (NCBI) 0.31 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) low > 76
Escherichia fergusonii Becca 0.50 EFB2_01421 GDP-mannose pyrophosphatase NudK 0.31 EFB2_02841 Phosphatase NudJ low > 86
Escherichia coli ECRC102 0.50 NIAGMN_19755 nudK GDP-mannose pyrophosphatase NudK 0.31 NIAGMN_24895 nudJ phosphatase NudJ — —
Escherichia coli ECRC101 0.50 MCAODC_12515 nudK GDP-mannose pyrophosphatase NudK 0.31 MCAODC_22335 nudJ phosphatase NudJ — —
Escherichia coli ECOR27 0.50 NOLOHH_13665 nudK GDP-mannose pyrophosphatase NudK 0.31 NOLOHH_20895 nudJ phosphatase NudJ — —
Escherichia coli ECOR38 0.50 HEPCGN_21155 nudK GDP-mannose pyrophosphatase NudK 0.31 HEPCGN_24225 nudJ phosphatase NudJ low > 85
Escherichia coli ECRC62 0.50 BNILDI_12475 nudK GDP-mannose pyrophosphatase NudK 0.31 BNILDI_19060 nudJ phosphatase NudJ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF2192 GDP-mannose pyrophosphatase YffH 0.27 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB low > 78
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_4078 GDP-mannose pyrophosphatase YffH 0.83 Pf1N1B4_4049 Nudix-like NDP and NTP phosphohydrolase YmfB low > 87

Not shown: 6 genomes with orthologs for PS417_15610 only; 27 genomes with orthologs for PS417_16535 only