Conservation of cofitness between PS417_02720 and PS417_16480 in Pseudomonas simiae WCS417

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_02720 TetR family transcriptional regulator 1.0 PS417_16480 recombination factor protein RarA 0.26 2
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS02790 TetR family transcriptional regulator 0.98 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS02790 TetR family transcriptional regulator 0.98 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.94 Pf1N1B4_4062 FIG065221: Holliday junction DNA helicase low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.93 Pf6N2E2_299 FIG065221: Holliday junction DNA helicase low > 103
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_08445 TetR family transcriptional regulator 0.93 AO356_22185 recombination factor protein RarA low > 104
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_13415 TetR family transcriptional regulator 0.94 AO353_27640 recombination factor protein RarA low > 101
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.93 PfGW456L13_2653 FIG065221: Holliday junction DNA helicase low > 87
Pseudomonas sp. RS175 0.89 PFR28_05164 HTH-type transcriptional repressor FabR 0.93 PFR28_02606 Replication-associated recombination protein A low > 88
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_4450 transcriptional regulator, TetR family 0.90 Psyr_3177 Recombination protein MgsA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_4450 transcriptional regulator, TetR family 0.90 Psyr_3177 Recombination protein MgsA low > 86
Pseudomonas putida KT2440 0.73 PP_4859 Transcriptional regulator, TetR family 0.91 PP_4002 DNA-dependent ATPase required for recombination low > 96
Pseudomonas sp. S08-1 0.71 OH686_16690 Transcriptional regulator, AcrR family 0.87 OH686_00270 Replication-associated recombination protein RarA low > 80
Marinobacter adhaerens HP15 0.31 HP15_2947 transcriptional regulator, TetR family protein 0.62 HP15_1817 recombination factor protein RarA low > 73
Acinetobacter radioresistens SK82 0.28 MPMX26_00037 HTH-type transcriptional repressor FabR 0.40 MPMX26_02987 Replication-associated recombination protein A low > 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.58 GFF4896 FIG065221: Holliday junction DNA helicase low > 78
Enterobacter sp. TBS_079 0.26 MPMX20_04517 HTH-type transcriptional repressor FabR 0.57 MPMX20_01554 Replication-associated recombination protein A low > 85
Pectobacterium carotovorum WPP14 0.26 HER17_RS00965 HTH-type transcriptional repressor FabR 0.56 HER17_RS12345 replication-associated recombination protein A low > 75
Pantoea sp. MT58 0.26 IAI47_00940 HTH-type transcriptional repressor FabR 0.57 IAI47_12900 replication-associated recombination protein A low > 76
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4426 transcriptional regulator, TetR family 0.58 EX28DRAFT_2040 ATPase related to the helicase subunit of the Holliday junction resolvase low > 76
Escherichia coli ECRC98 0.26 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.58 JDDGAC_09370 rarA replication-associated recombination protein RarA
Escherichia coli BL21 0.26 ECD_03848 transcriptional repressor of fabA and fabB 0.58 ECD_00896 recombination intermediate processing DNA-dependent ATPase low > 60
Escherichia coli ECRC62 0.26 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.57 BNILDI_20385 rarA replication-associated recombination protein RarA
Escherichia coli BW25113 0.26 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.58 b0892 ycaJ recombination protein (NCBI) low > 76
Escherichia coli ECOR38 0.26 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.58 HEPCGN_22950 rarA replication-associated recombination protein RarA low > 85
Escherichia coli ECRC99 0.26 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.58 KEDOAH_22175 rarA replication-associated recombination protein RarA
Escherichia fergusonii Becca 0.26 EFB2_04647 HTH-type transcriptional repressor FabR 0.58 EFB2_03169 Replication-associated recombination protein A low > 86
Escherichia coli ECRC101 0.26 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.58 MCAODC_24950 rarA replication-associated recombination protein RarA
Escherichia coli ECRC102 0.26 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.58 NIAGMN_03280 rarA replication-associated recombination protein RarA
Escherichia coli Nissle 1917 0.26 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.58 ECOLIN_RS04745 replication-associated recombination protein RarA low > 52
Escherichia coli ECOR27 0.26 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.57 NOLOHH_22130 rarA replication-associated recombination protein RarA low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.58 OHPLBJKB_02776 Replication-associated recombination protein A low > 73
Escherichia coli ECRC101 0.26 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.58 OKFHMN_05560 rarA replication-associated recombination protein RarA
Serratia liquefaciens MT49 0.26 IAI46_24465 HTH-type transcriptional repressor FabR 0.58 IAI46_08570 replication-associated recombination protein A low > 86
Klebsiella michiganensis M5al 0.26 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.59 BWI76_RS09670 recombination factor protein RarA low > 92
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_1831 transcriptional regulator, TetR family 0.66 B158DRAFT_1819 ATPase related to the helicase subunit of the Holliday junction resolvase low > 40
Dickeya dianthicola ME23 0.26 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.57 DZA65_RS09930 replication-associated recombination protein A low > 75
Rahnella sp. WP5 0.25 EX31_RS14160 HTH-type transcriptional repressor FabR 0.59 EX31_RS18515 replication-associated recombination protein A low > 89
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_00775 HTH-type transcriptional repressor FabR 0.57 CSW01_05630 replication-associated recombination protein A low > 62
Dickeya dadantii 3937 0.25 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.57 DDA3937_RS09605 replication-associated recombination protein A low > 74
Dickeya dianthicola 67-19 0.25 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.57 HGI48_RS09620 replication-associated recombination protein A low > 71
Erwinia tracheiphila SCR3 0.25 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.57 LU632_RS09755 replication-associated recombination protein A low > 74
Alteromonas macleodii MIT1002 0.25 MIT1002_03371 HTH-type transcriptional repressor FabR 0.54 MIT1002_02178 Replication-associated recombination protein A low > 70
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.4923.1 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.54 Xcc-8004.2744.1 FIG065221: Holliday junction DNA helicase low > 74
Lysobacter sp. OAE881 0.16 ABIE51_RS00935 HTH-type transcriptional repressor FabR 0.50 ABIE51_RS11445 replication-associated recombination protein A low > 62

Not shown: 0 genomes with orthologs for PS417_02720 only; 55 genomes with orthologs for PS417_16480 only