Conservation of cofitness between PS417_00165 and PS417_16465 in Pseudomonas simiae WCS417

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00165 galactonate dehydratase 1.0 PS417_16465 sirohydrochlorin ferrochelatase 0.15 14
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS00160 galactonate dehydratase 0.99 PFLU_RS18505 uroporphyrinogen-III C-methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS00160 galactonate dehydratase 0.99 PFLU_RS18505 uroporphyrinogen-III C-methyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.99 Pf1N1B4_398 Galactonate dehydratase (EC 4.2.1.6) 0.91 Pf1N1B4_4065 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) low > 87
Pseudomonas fluorescens FW300-N2E2 0.99 Pf6N2E2_5977 Galactonate dehydratase (EC 4.2.1.6) 0.92 Pf6N2E2_302 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) low > 103
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_20290 galactonate dehydratase 0.92 AO356_22200 sirohydrochlorin ferrochelatase 0.17 92
Pseudomonas sp. RS175 0.98 PFR28_02985 D-galactonate dehydratase 0.91 PFR28_02603 Siroheme synthase low > 88
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2128 Galactonate dehydratase (EC 4.2.1.6) 0.91 PfGW456L13_2656 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.97 Psyr_1989 galactonate dehydratase 0.90 Psyr_3174 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.97 Psyr_1989 galactonate dehydratase 0.90 Psyr_3174 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase low > 86
Dyella japonica UNC79MFTsu3.2 0.81 ABZR86_RS01215 galactonate dehydratase 0.41 ABZR86_RS05880 siroheme synthase CysG low > 74
Rhodanobacter sp. FW510-T8 0.81 OKGIIK_12510 dgoD galactonate dehydratase 0.39 OKGIIK_05980 cysG siroheme synthase CysG low > 52
Rhizobium sp. OAE497 0.80 ABIE40_RS17095 galactonate dehydratase 0.32 ABIE40_RS09140 siroheme synthase CysG low > 107
Lysobacter sp. OAE881 0.80 ABIE51_RS10935 galactonate dehydratase 0.40 ABIE51_RS15855 siroheme synthase CysG low > 62
Sinorhizobium meliloti 1021 0.79 SM_b20510 galactonate dehydratase 0.34 SMc01053 siroheme synthase low > 103
Pantoea sp. MT58 0.63 IAI47_00045 galactonate dehydratase 0.46 IAI47_04175 uroporphyrinogen-III C-methyltransferase low > 76
Rahnella sp. WP5 0.63 EX31_RS10320 galactonate dehydratase 0.47 EX31_RS04680 uroporphyrinogen-III C-methyltransferase low > 89
Dickeya dianthicola 67-19 0.62 HGI48_RS06940 galactonate dehydratase 0.46 HGI48_RS17000 uroporphyrinogen-III C-methyltransferase low > 71
Escherichia coli ECOR38 0.62 HEPCGN_13775 dgoD galactonate dehydratase 0.48 HEPCGN_16010 cysG siroheme synthase CysG low > 85
Escherichia fergusonii Becca 0.62 EFB2_00011 D-galactonate dehydratase 0.48 EFB2_00454 Siroheme synthase low > 86
Dickeya dianthicola ME23 0.62 DZA65_RS07285 galactonate dehydratase 0.45 DZA65_RS18075 uroporphyrinogen-III C-methyltransferase low > 75
Escherichia coli Nissle 1917 0.62 ECOLIN_RS21265 galactonate dehydratase 0.48 ECOLIN_RS19285 siroheme synthase CysG low > 52
Escherichia coli BW25113 0.62 b4478 dgoD galactonate dehydratase (NCBI) 0.48 b3368 cysG fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_00011 D-galactonate dehydratase 0.48 OHPLBJKB_00334 Siroheme synthase low > 73
Escherichia coli ECRC62 0.62 BNILDI_04320 dgoD galactonate dehydratase 0.48 BNILDI_02540 cysG siroheme synthase CysG — —
Escherichia coli ECOR27 0.62 NOLOHH_07210 dgoD galactonate dehydratase 0.48 NOLOHH_08980 cysG siroheme synthase CysG low > 57
Escherichia coli BL21 0.62 ECD_03575 D-galactonate dehydratase 0.48 ECD_03219 fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1765 Galactonate dehydratase (EC 4.2.1.6) 0.48 GFF3700 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) low > 78
Enterobacter asburiae PDN3 0.61 EX28DRAFT_3979 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 0.49 EX28DRAFT_4160 uroporphyrin-III C-methyltransferase low > 76
Enterobacter sp. TBS_079 0.61 MPMX20_00011 D-galactonate dehydratase 0.49 MPMX20_04271 Siroheme synthase low > 85
Klebsiella michiganensis M5al 0.61 BWI76_RS27935 galactonate dehydratase 0.49 BWI76_RS26055 siroheme synthase low > 92
Pectobacterium carotovorum WPP14 0.26 HER17_RS07505 mandelate racemase/muconate lactonizing enzyme family protein 0.48 HER17_RS01835 siroheme synthase CysG low > 75
Dickeya dadantii 3937 0.25 DDA3937_RS14965 D-galactonate dehydratase family protein 0.45 DDA3937_RS16930 uroporphyrinogen-III C-methyltransferase low > 74
Alteromonas macleodii MIT1002 0.25 MIT1002_00725 D-galactonate dehydratase 0.53 MIT1002_00665 Siroheme synthase — —
Serratia liquefaciens MT49 0.24 IAI46_19025 D-galactonate dehydratase family protein 0.47 IAI46_23670 uroporphyrinogen-III C-methyltransferase low > 86
Agrobacterium fabrum C58 0.24 Atu4196 hypothetical protein 0.33 Atu1454 siroheme synthase low > 89
Bosea sp. OAE506 0.15 ABIE41_RS08260 mandelate racemase/muconate lactonizing enzyme family protein 0.31 ABIE41_RS15910 siroheme synthase CysG — —
Dinoroseobacter shibae DFL-12 0.14 Dshi_2447 Mandelate racemase/muconate lactonizing protein (RefSeq) 0.28 Dshi_1155 uroporphyrin-III C-methyltransferase (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.13 A4249_RS07695 L-rhamnonate dehydratase 0.35 A4249_RS09675 siroheme synthase CysG low > 48
Pseudomonas stutzeri RCH2 0.13 Psest_0369 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 0.79 Psest_2037 uroporphyrin-III C-methyltransferase low > 67

Not shown: 24 genomes with orthologs for PS417_00165 only; 17 genomes with orthologs for PS417_16465 only