Conservation of cofitness between GFF1681 and GFF3040 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1681 Ferritin-like protein 2 1.0 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.39 19
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0647 Ferritin-like protein 0.96 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) low > 76
Klebsiella michiganensis M5al 0.94 BWI76_RS18285 ferritin 0.96 BWI76_RS24030 arginine decarboxylase low > 92
Escherichia coli ECRC102 0.94 NIAGMN_02020 ftnA non-heme ferritin 0.98 NIAGMN_17070 speA biosynthetic arginine decarboxylase — —
Escherichia coli ECOR38 0.94 HEPCGN_04465 ftnA non-heme ferritin 0.98 HEPCGN_18610 speA biosynthetic arginine decarboxylase low > 87
Escherichia coli ECOR27 0.94 NOLOHH_16485 ftnA non-heme ferritin 0.98 NOLOHH_11175 speA biosynthetic arginine decarboxylase low > 75
Escherichia coli ECRC62 0.94 BNILDI_15275 ftnA non-heme ferritin 0.98 BNILDI_09755 speA biosynthetic arginine decarboxylase low > 75
Escherichia fergusonii Becca 0.94 EFB2_02041 Bacterial non-heme ferritin 0.98 EFB2_00962 Biosynthetic arginine decarboxylase low > 86
Escherichia coli ECRC99 0.94 KEDOAH_02060 ftnA non-heme ferritin 0.98 KEDOAH_08835 speA biosynthetic arginine decarboxylase — —
Escherichia coli ECRC101 0.94 MCAODC_19360 ftnA non-heme ferritin 0.98 MCAODC_09825 speA biosynthetic arginine decarboxylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_01824 Bacterial non-heme ferritin 0.98 OHPLBJKB_00778 Biosynthetic arginine decarboxylase low > 73
Escherichia coli Nissle 1917 0.94 ECOLIN_RS10855 non-heme ferritin 0.98 ECOLIN_RS16350 biosynthetic arginine decarboxylase — —
Escherichia coli BW25113 0.94 b1905 ftn ferritin iron storage protein (cytoplasmic) (NCBI) 0.98 b2938 speA arginine decarboxylase (NCBI) low > 76
Escherichia coli BL21 0.94 ECD_01873 ferritin iron storage protein (cytoplasmic) 0.98 ECD_02768 biosynthetic arginine decarboxylase, PLP-binding low > 61
Escherichia coli ECRC100 0.94 OKFHMN_26045 ftnA non-heme ferritin 0.98 OKFHMN_19305 speA biosynthetic arginine decarboxylase low > 80
Escherichia coli ECRC98 0.94 JDDGAC_00620 ftnA non-heme ferritin 0.98 JDDGAC_22935 speA biosynthetic arginine decarboxylase low > 86
Enterobacter sp. TBS_079 0.93 MPMX20_02816 Bacterial non-heme ferritin 0.96 MPMX20_03799 Biosynthetic arginine decarboxylase low > 85
Serratia liquefaciens MT49 0.70 IAI46_10000 non-heme ferritin 0.89 IAI46_21140 biosynthetic arginine decarboxylase low > 86
Pantoea sp. MT58 0.68 IAI47_03320 non-heme ferritin 0.88 IAI47_03660 biosynthetic arginine decarboxylase low > 76
Dickeya dadantii 3937 0.67 DDA3937_RS10170 non-heme ferritin 0.89 DDA3937_RS18535 biosynthetic arginine decarboxylase low > 74
Pectobacterium carotovorum WPP14 0.67 HER17_RS11755 non-heme ferritin 0.88 HER17_RS02665 biosynthetic arginine decarboxylase low > 75
Dickeya dianthicola ME23 0.66 DZA65_RS10615 non-heme ferritin 0.88 DZA65_RS19595 biosynthetic arginine decarboxylase low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS10200 non-heme ferritin 0.88 HGI48_RS18460 biosynthetic arginine decarboxylase low > 71
Erwinia tracheiphila SCR3 0.66 LU632_RS20390 ftnA non-heme ferritin 0.90 LU632_RS05510 speA biosynthetic arginine decarboxylase low > 74
Rahnella sp. WP5 0.66 EX31_RS24765 non-heme ferritin 0.87 EX31_RS21355 biosynthetic arginine decarboxylase low > 89
Shewanella amazonensis SB2B 0.65 Sama_0141 ferritin (RefSeq) 0.55 Sama_1963 arginine decarboxylase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_00420 ferritin 0.54 CSW01_18235 arginine decarboxylase low > 62
Shewanella sp. ANA-3 0.64 Shewana3_0132 Ferritin, Dps family protein (RefSeq) 0.56 Shewana3_1624 arginine decarboxylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO0139 ftn ferritin (NCBI ptt file) 0.56 SO1870 speA biosynthetic arginine decarboxylase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.62 Shew_0042 Ferritin, Dps family protein (RefSeq) 0.56 Shew_1619 arginine decarboxylase (RefSeq) — —
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_0183 Ferroxidase (RefSeq) 0.35 DvMF_1536 arginine decarboxylase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU1568 ftn ferritin (TIGR) 0.34 DVU0417 speA arginine decarboxylase (TIGR) low > 55
Bacteroides ovatus ATCC 8483 0.27 BACOVA_00214 ferritin 0.41 BACOVA_01911 arginine 2-monooxygenase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.26 BT1373 ferritin A (NCBI ptt file) 0.42 BT3394 putative arginine decarboxylase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS17850 ferritin 0.40 HMPREF1058_RS12110 biosynthetic arginine decarboxylase low > 67
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS10955 ferritin 0.41 HMPREF1181_RS02535 biosynthetic arginine decarboxylase low > 56
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS14115 ferritin 0.40 ABI39_RS04690 biosynthetic arginine decarboxylase low > 72
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS14355 ferritin 0.41 HMPREF1078_RS15005 biosynthetic arginine decarboxylase low > 61

Not shown: 6 genomes with orthologs for GFF1681 only; 24 genomes with orthologs for GFF3040 only