Conservation of cofitness between GFF4896 and GFF2722 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4896 FIG065221: Holliday junction DNA helicase 1.0 GFF2722 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.45 7
Escherichia coli ECRC102 0.97 NIAGMN_03280 rarA replication-associated recombination protein RarA 0.90 NIAGMN_26825 trpE anthranilate synthase component I
Escherichia coli ECRC99 0.97 KEDOAH_22175 rarA replication-associated recombination protein RarA 0.91 KEDOAH_26095 trpE anthranilate synthase component I
Escherichia coli ECOR38 0.97 HEPCGN_22950 rarA replication-associated recombination protein RarA 0.88 HEPCGN_25535 trpE anthranilate synthase component I low > 87
Escherichia coli ECRC100 0.97 OKFHMN_05560 rarA replication-associated recombination protein RarA 0.90 OKFHMN_02655 trpE anthranilate synthase component I low > 80
Escherichia coli ECRC98 0.97 JDDGAC_09370 rarA replication-associated recombination protein RarA 0.91 JDDGAC_05200 trpE anthranilate synthase component I low > 86
Escherichia coli ECRC101 0.97 MCAODC_24950 rarA replication-associated recombination protein RarA 0.90 MCAODC_15610 trpE anthranilate synthase component I low > 87
Escherichia coli Nissle 1917 0.97 ECOLIN_RS04745 replication-associated recombination protein RarA 0.90 ECOLIN_RS07615 anthranilate synthase component I
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_02776 Replication-associated recombination protein A 0.90 OHPLBJKB_02419 Anthranilate synthase component 1 low > 73
Escherichia fergusonii Becca 0.97 EFB2_03169 Replication-associated recombination protein A 0.90 EFB2_02662 Anthranilate synthase component 1 low > 86
Escherichia coli BL21 0.97 ECD_00896 recombination intermediate processing DNA-dependent ATPase 0.88 ECD_01238 component I of anthranilate synthase low > 61
Escherichia coli BW25113 0.97 b0892 ycaJ recombination protein (NCBI) 0.89 b1264 trpE anthranilate synthase component I (NCBI) low > 76
Escherichia coli ECOR27 0.97 NOLOHH_22130 rarA replication-associated recombination protein RarA 0.91 NOLOHH_20315 trpE anthranilate synthase component I low > 75
Klebsiella michiganensis M5al 0.95 BWI76_RS09670 recombination factor protein RarA 0.85 BWI76_RS11860 anthranilate synthase component I low > 92
Enterobacter sp. TBS_079 0.95 MPMX20_01554 Replication-associated recombination protein A 0.87 MPMX20_02510 Anthranilate synthase component 1 low > 85
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2040 ATPase related to the helicase subunit of the Holliday junction resolvase 0.85 EX28DRAFT_0936 anthranilate synthase, component I (EC 4.1.3.27) low > 76
Pantoea sp. MT58 0.90 IAI47_12900 replication-associated recombination protein A 0.74 IAI47_09190 anthranilate synthase component 1 low > 76
Serratia liquefaciens MT49 0.89 IAI46_08570 replication-associated recombination protein A 0.73 IAI46_14020 anthranilate synthase component 1 low > 86
Dickeya dadantii 3937 0.89 DDA3937_RS09605 replication-associated recombination protein A 0.76 DDA3937_RS10485 anthranilate synthase component 1 low > 74
Pectobacterium carotovorum WPP14 0.89 HER17_RS12345 replication-associated recombination protein A 0.76 HER17_RS10915 anthranilate synthase component 1 low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS09620 replication-associated recombination protein A 0.77 HGI48_RS10485 anthranilate synthase component 1 low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS09930 replication-associated recombination protein A 0.76 DZA65_RS10965 anthranilate synthase component 1 low > 75
Rahnella sp. WP5 0.88 EX31_RS18515 replication-associated recombination protein A 0.75 EX31_RS09955 anthranilate synthase component 1 low > 89
Erwinia tracheiphila SCR3 0.84 LU632_RS09755 replication-associated recombination protein A 0.72 LU632_RS12755 anthranilate synthase component 1 low > 74
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_05630 replication-associated recombination protein A 0.58 CSW01_05950 anthranilate synthase component I low > 62
Shewanella sp. ANA-3 0.66 Shewana3_2052 recombination factor protein RarA (RefSeq) 0.49 Shewana3_1520 anthranilate synthase component I (RefSeq) low > 73
Shewanella oneidensis MR-1 0.65 SO2308 ATPase, AAA family (NCBI ptt file) 0.49 SO3019 trpE anthranilate synthase component I (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.64 Shew_2022 recombination factor protein RarA (RefSeq) 0.49 Shew_2251 anthranilate synthase component I (RefSeq) low > 60
Shewanella amazonensis SB2B 0.63 Sama_1774 recombination factor protein RarA (RefSeq) 0.49 Sama_2129 anthranilate synthase component I (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.59 MIT1002_02178 Replication-associated recombination protein A 0.52 MIT1002_01430 Anthranilate synthase component 1 low > 70
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_1819 ATPase related to the helicase subunit of the Holliday junction resolvase 0.31 B158DRAFT_2425 anthranilate synthase, component I (EC 4.1.3.27) low > 40
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2744.1 FIG065221: Holliday junction DNA helicase 0.23 Xcc-8004.608.1 Anthranilate synthase, aminase component (EC 4.1.3.27) low > 74
Lysobacter sp. OAE881 0.46 ABIE51_RS11445 replication-associated recombination protein A 0.22 ABIE51_RS04150 anthranilate synthase component I low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_02215 AAA family ATPase 0.16 CA264_05055 anthranilate synthase component I low > 74
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03971 ATPase, AAA family 0.18 BACOVA_03780 chorismate binding enzyme low > 94
Caulobacter crescentus NA1000 0.39 CCNA_01342 ATPase, AAA family 0.22 CCNA_01972 anthranilate synthase component I low > 66
Magnetospirillum magneticum AMB-1 0.39 AMB_RS17620 replication-associated recombination protein A 0.22 AMB_RS09175 anthranilate synthase component I
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_01342 ATPase, AAA family 0.22 CCNA_01972 anthranilate synthase component I low > 67
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS15395 replication-associated recombination protein A 0.19 HMPREF1078_RS00145 anthranilate synthase component I family protein low > 61
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS16975 replication-associated recombination protein A 0.17 HMPREF1181_RS15325 anthranilate synthase component I family protein low > 56
Bifidobacterium breve UCC2003 0.35 BBR_RS17330 replication-associated recombination protein A 0.23 BBR_RS16085 anthranilate synthase component I low > 34

Not shown: 58 genomes with orthologs for GFF4896 only; 1 genomes with orthologs for GFF2722 only