Conservation of cofitness between PS417_25395 and PS417_13500 in Pseudomonas simiae WCS417

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_25395 excinuclease ABC subunit A 1.0 PS417_13500 ATP-dependent DNA helicase 0.63 3
Pseudomonas fluorescens SBW25 1.00 PFLU_RS27025 excinuclease ABC subunit UvrA 0.95 PFLU_RS15300 ATP-dependent DNA helicase low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS27025 excinuclease ABC subunit UvrA 0.95 PFLU_RS15300 ATP-dependent DNA helicase low > 109
Pseudomonas lactucae CFBP13502 0.99 GEMAOFIL_05194 UvrABC system protein A 0.89 GEMAOFIL_03099 '3'-5' exonuclease DinG' transl_table=11 low > 93
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2611 Excinuclease ABC subunit A 0.80 Pf1N1B4_4935 DinG family ATP-dependent helicase CPE1197 0.39 18
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_1283 Excinuclease ABC subunit A 0.78 PfGW456L13_3086 DinG family ATP-dependent helicase CPE1197 0.33 32
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_06855 ABC-ATPase UvrA 0.80 AO353_24755 ATP-dependent DNA helicase 0.55 13
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_14785 ABC-ATPase UvrA 0.79 AO356_26990 ATP-dependent DNA helicase 0.42 25
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_4888 Excinuclease ABC subunit A 0.79 Pf6N2E2_1225 DinG family ATP-dependent helicase CPE1197 0.43 16
Pseudomonas sp. RS175 0.97 PFR28_03974 UvrABC system protein A 0.77 PFR28_02114 '3'-5' exonuclease DinG' transl_table=11 low > 88
Pseudomonas sp. DMC3 0.97 GFF3792 UvrABC system protein A 0.78 GFF2844 3'-5' exonuclease DinG low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4520 Excinuclease ABC subunit A 0.74 Psyr_2909 DEAD_2 0.22 75
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4520 Excinuclease ABC subunit A 0.74 Psyr_2909 DEAD_2 low > 86
Pseudomonas sp. SVBP6 0.95 COO64_RS16075 uvrA excinuclease ABC subunit UvrA 0.67 COO64_RS25380 ATP-dependent DNA helicase low > 93
Pseudomonas sp. BP01 0.93 JOY50_RS20305 uvrA excinuclease ABC subunit UvrA 0.66 JOY50_RS05630 ATP-dependent DNA helicase low > 84
Pseudomonas putida KT2440 0.93 PP_0483 excinuclease (uvrABC system protein A) 0.66 PP_2839 conserved protein of unknown function — —
Pseudomonas sp. S08-1 0.92 OH686_15495 excinuclease ABC subunit A 0.60 OH686_06000 DinG family ATP-dependent helicase low > 80
Pseudomonas aeruginosa PA14 0.91 IKLFDK_21795 excinuclease ABC subunit UvrA 0.64 IKLFDK_09095 ATP-dependent DNA helicase low > 100
Pseudomonas stutzeri RCH2 0.90 Psest_3576 excinuclease ABC, A subunit 0.65 Psest_2236 Rad3-related DNA helicases 0.58 10
Marinobacter adhaerens HP15 0.77 HP15_406 excinuclease ABC, ATPase subunit (A) 0.47 HP15_3721 Rad3-related DNA helicase low > 73
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS19810 excinuclease ABC subunit A 0.57 HSERO_RS06500 ATP-dependent DNA helicase 0.40 41
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS02970 excinuclease ABC subunit A 0.60 BPHYT_RS26935 ATP-dependent DNA helicase 0.35 19
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS01825 excinuclease ABC subunit UvrA 0.59 QEN71_RS10715 ATP-dependent DNA helicase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_01913 Excinuclease ABC subunit A 0.60 H281DRAFT_02901 DNA excision repair protein ERCC-2 low > 103
Paraburkholderia graminis OAS925 0.69 ABIE53_000732 excinuclease ABC subunit A 0.61 ABIE53_005889 DNA excision repair protein ERCC-2 low > 113
Variovorax sp. SCN45 0.66 GFF4944 Excinuclease ABC subunit A 0.54 GFF164 DinG family ATP-dependent helicase CPE1197 low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF2755 Excinuclease ABC subunit A 0.54 GFF225 DinG family ATP-dependent helicase CPE1197 low > 90
Variovorax sp. OAS795 0.66 ABID97_RS04340 excinuclease ABC subunit UvrA 0.54 ABID97_RS16280 ATP-dependent DNA helicase low > 91
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4387 Excinuclease ABC subunit A 0.60 Ac3H11_593 DinG family ATP-dependent helicase CPE1197 0.39 30

Not shown: 90 genomes with orthologs for PS417_25395 only; 0 genomes with orthologs for PS417_13500 only