Conservation of cofitness between GFF4989 and GFF2627 in Variovorax sp. SCN45

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF4989 Transcriptional regulator, LysR family 1.0 GFF2627 Chorismate synthase (EC 4.2.3.5) 0.51 19
Variovorax sp. OAS795 0.81 ABID97_RS04250 LysR family transcriptional regulator 0.91 ABID97_RS19805 chorismate synthase — —
Pseudomonas putida KT2440 0.40 PP_2997 CnmA 0.60 PP_1830 Chorismate synthase — —
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS18430 LysR family transcriptional regulator 0.72 ABZR87_RS13790 chorismate synthase low > 80
Castellaniella sp019104865 MT123 0.40 ABCV34_RS11570 LysR family transcriptional regulator 0.69 ABCV34_RS04300 chorismate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_01676 transcriptional regulator, LysR family 0.72 H281DRAFT_04489 chorismate synthase — —
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS27350 LysR family transcriptional regulator 0.72 BPHYT_RS13705 chorismate synthase low > 109
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS19485 LysR family transcriptional regulator 0.72 QEN71_RS05215 chorismate synthase low > 153
Klebsiella michiganensis M5al 0.34 BWI76_RS01055 LysR family transcriptional regulator 0.58 BWI76_RS20435 chorismate synthase low > 92
Shewanella amazonensis SB2B 0.30 Sama_2520 putative transcriptional regulator (RefSeq) 0.60 Sama_2159 chorismate synthase (RefSeq) — —
Marinobacter adhaerens HP15 0.28 HP15_820 transcriptional regulator, LysR family protein 0.65 HP15_1838 chorismate synthase — —
Shewanella loihica PV-4 0.28 Shew_2857 LysR family transcriptional regulator (RefSeq) 0.57 Shew_2416 chorismate synthase (RefSeq) low > 60
Serratia liquefaciens MT49 0.27 IAI46_16085 LysR family transcriptional regulator 0.57 IAI46_18025 chorismate synthase low > 86
Sinorhizobium meliloti 1021 0.26 SMa1956 hypothetical protein 0.48 SMc00007 chorismate synthase — —
Alteromonas macleodii MIT1002 0.26 MIT1002_02832 Nodulation protein D 2 0.61 MIT1002_01229 Chorismate synthase — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS16250 LysR family transcriptional regulator 0.56 AZOBR_RS10730 chorismate synthase — —
Enterobacter sp. TBS_079 0.24 MPMX20_02266 PCP degradation transcriptional activation protein 0.58 MPMX20_03264 Chorismate synthase low > 85
Shewanella sp. ANA-3 0.23 Shewana3_3949 LysR family transcriptional regulator (RefSeq) 0.57 Shewana3_1469 chorismate synthase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_12575 transcriptional regulator LeuO 0.59 CSW01_10560 chorismate synthase low > 62
Escherichia coli ECRC98 0.22 JDDGAC_14300 leuO transcriptional regulator LeuO 0.58 JDDGAC_26575 aroC chorismate synthase low > 86
Escherichia coli ECRC101 0.22 MCAODC_01220 leuO transcriptional regulator LeuO 0.58 MCAODC_13655 aroC chorismate synthase low > 87
Escherichia coli ECRC99 0.22 KEDOAH_17450 leuO transcriptional regulator LeuO 0.58 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli ECRC100 0.22 OKFHMN_10705 leuO transcriptional regulator LeuO 0.58 OKFHMN_22615 aroC chorismate synthase low > 80
Escherichia coli ECRC102 0.22 NIAGMN_08555 leuO transcriptional regulator LeuO 0.58 NIAGMN_20390 aroC chorismate synthase — —
Escherichia coli Nissle 1917 0.22 ECOLIN_RS00410 transcriptional regulator LeuO 0.58 ECOLIN_RS13490 chorismate synthase — —
Escherichia fergusonii Becca 0.22 EFB2_03970 HTH-type transcriptional regulator LeuO 0.58 EFB2_01529 Chorismate synthase low > 86
Escherichia coli ECRC62 0.22 BNILDI_08560 leuO transcriptional regulator LeuO 0.58 BNILDI_13170 aroC chorismate synthase low > 75
Escherichia coli ECOR38 0.22 HEPCGN_08685 leuO transcriptional regulator LeuO 0.58 HEPCGN_21820 aroC chorismate synthase low > 87
Escherichia coli ECOR27 0.22 NOLOHH_03050 leuO transcriptional regulator LeuO 0.58 NOLOHH_14250 aroC chorismate synthase low > 75
Escherichia coli BW25113 0.22 b0076 leuO probable transcriptional activator for leuABCD operon (VIMSS) 0.58 b2329 aroC chorismate synthase (NCBI) 0.45 47
Escherichia coli BL21 0.22 ECD_00078 global transcription factor 0.58 ECD_02254 chorismate synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_03582 HTH-type transcriptional regulator LeuO 0.58 OHPLBJKB_01376 Chorismate synthase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF162 Probable transcriptional activator for leuABCD operon 0.58 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Caulobacter crescentus NA1000 0.17 CCNA_02227 LysR-family transcriptional regulator 0.45 CCNA_03256 chorismate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_02227 LysR-family transcriptional regulator 0.45 CCNA_03256 chorismate synthase 0.66 13

Not shown: 1 genomes with orthologs for GFF4989 only; 68 genomes with orthologs for GFF2627 only