| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_2221 | | pseudouridine synthase, RluA family | 1.0 | HP15_2514 | | lysine 2,3-aminomutase YodO family protein | 0.51 | 1 |
| Pantoea sp. MT58 | 0.48 | IAI47_12105 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.49 | IAI47_17295 | | EF-P beta-lysylation protein EpmB | — | — |
| Erwinia tracheiphila SCR3 | 0.48 | LU632_RS14855 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.48 | LU632_RS01880 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Alteromonas macleodii MIT1002 | 0.47 | MIT1002_01725 | | Ribosomal large subunit pseudouridine synthase C | 0.49 | MIT1002_00681 | | L-lysine 2,3-aminomutase | low | > 70 |
| Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_1844 | | pseudouridine synthase, RluA family | 0.49 | EX28DRAFT_3342 | | EF-P beta-lysylation protein EpmB | — | — |
| Enterobacter sp. TBS_079 | 0.47 | MPMX20_01766 | | Ribosomal large subunit pseudouridine synthase C | 0.49 | MPMX20_00425 | | L-lysine 2,3-aminomutase | — | — |
| Escherichia coli ECRC101 | 0.46 | OKFHMN_03615 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.51 | OKFHMN_12395 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Escherichia coli ECRC99 | 0.46 | KEDOAH_24140 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.51 | KEDOAH_15770 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Escherichia coli ECRC98 | 0.46 | JDDGAC_07275 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.51 | JDDGAC_16030 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Escherichia coli ECRC101 | 0.46 | MCAODC_22975 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.51 | MCAODC_02905 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Escherichia coli ECRC102 | 0.46 | NIAGMN_24215 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.51 | NIAGMN_10240 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Escherichia coli BW25113 | 0.46 | b1086 | rluC | 23S rRNA pseudouridylate synthase (NCBI) | 0.50 | b4146 | yjeK | predicted lysine aminomutase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.46 | HEPCGN_23865 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.50 | HEPCGN_10620 | epmB | EF-P beta-lysylation protein EpmB | 0.95 | 24 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS06280 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.51 | ECOLIN_RS24080 | | EF-P beta-lysylation protein EpmB | — | — |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_21145 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.49 | NOLOHH_04655 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Escherichia coli ECRC62 | 0.46 | BNILDI_19305 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.49 | BNILDI_06835 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Klebsiella michiganensis M5al | 0.46 | BWI76_RS11050 | | 23S rRNA pseudouridine(955/2504/2580) synthase | 0.50 | BWI76_RS02410 | | EF-P beta-lysylation protein EpmB | low | > 92 |
| Escherichia coli BL21 | 0.46 | ECD_01082 | | 23S rRNA pseudouridine(955,2504,2580) synthase | 0.51 | ECD_04016 | | EF-P-Lys34 lysylation protein; weak lysine 2,3-aminomutase | — | — |
| Escherichia fergusonii Becca | 0.46 | EFB2_02889 | | Ribosomal large subunit pseudouridine synthase C | 0.50 | EFB2_04389 | | L-lysine 2,3-aminomutase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.46 | OHPLBJKB_02580 | | Ribosomal large subunit pseudouridine synthase C | 0.49 | OHPLBJKB_03896 | | L-lysine 2,3-aminomutase | 0.78 | 49 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF3366 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.48 | GFF2006 | | Lysyl-lysine 2,3-aminomutase | — | — |
| Rahnella sp. WP5 | 0.46 | EX31_RS24400 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.46 | EX31_RS08940 | | EF-P beta-lysylation protein EpmB | — | — |
| Kangiella aquimarina DSM 16071 | 0.45 | B158DRAFT_1770 | | ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) | 0.50 | B158DRAFT_0984 | | lysine-2,3-aminomutase-related protein | low | > 40 |
| Vibrio cholerae E7946 ATCC 55056 | 0.45 | CSW01_10130 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.50 | CSW01_13450 | | EF-P beta-lysylation protein EpmB | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.44 | HER17_RS08615 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.47 | HER17_RS02350 | | EF-P beta-lysylation protein EpmB | — | — |
| Serratia liquefaciens MT49 | 0.44 | IAI46_09755 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.48 | IAI46_01505 | | EF-P beta-lysylation protein EpmB | — | — |
| Dickeya dadantii 3937 | 0.44 | DDA3937_RS13155 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.46 | DDA3937_RS19000 | | EF-P beta-lysylation protein EpmB | low | > 74 |
| Dickeya dianthicola 67-19 | 0.44 | HGI48_RS13220 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.45 | HGI48_RS19090 | | EF-P beta-lysylation protein EpmB | low | > 71 |
| Dickeya dianthicola ME23 | 0.44 | DZA65_RS13690 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.45 | DZA65_RS20210 | | EF-P beta-lysylation protein EpmB | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.2616.1 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.44 | Xcc-8004.2285.1 | | Lysyl-lysine 2,3-aminomutase | — | — |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS11800 | | RluA family pseudouridine synthase | 0.45 | ABIE51_RS13505 | | EF-P beta-lysylation protein EpmB | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS17895 | | RluA family pseudouridine synthase | 0.41 | LRK54_RS02485 | | EF-P beta-lysylation protein EpmB | — | — |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS17750 | | RluA family pseudouridine synthase | 0.41 | LRK55_RS02240 | | EF-P beta-lysylation protein EpmB | — | — |
| Rhodanobacter sp. FW510-T8 | 0.37 | OKGIIK_07405 | rluA | 23S rRNA pseudouridine(955/2504/2580) synthase | 0.42 | OKGIIK_09540 | epmB | EF-P beta-lysylation protein EpmB | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.35 | ABZR86_RS02725 | | RluA family pseudouridine synthase | 0.40 | ABZR86_RS08800 | | EF-P beta-lysylation protein EpmB | — | — |
| Agrobacterium fabrum C58 | 0.23 | Atu1471 | | ribosomal large subunit pseudouridine synthase C | 0.24 | Atu2555 | | L-lysine 2,3-aminomutase | — | — |
| Sinorhizobium meliloti 1021 | 0.22 | SMc01275 | | ribosomal large subunit pseudouridine synthase C protein | 0.23 | SMc00355 | | hypothetical protein | low | > 103 |
| Rhodospirillum rubrum S1H | 0.21 | Rru_A2659 | | Pseudouridine synthase, RluD (NCBI) | 0.25 | Rru_A0224 | | Protein of unknown function DUF160 (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.20 | MPMX19_01718 | | Ribosomal large subunit pseudouridine synthase C | 0.24 | MPMX19_00061 | | L-lysine 2,3-aminomutase | low | > 112 |
| Magnetospirillum magneticum AMB-1 | 0.20 | AMB_RS15620 | | RluA family pseudouridine synthase | 0.24 | AMB_RS06530 | | lysine-2,3-aminomutase-like protein | — | — |
| Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS06905 | | pseudouridine synthase | 0.26 | AZOBR_RS01360 | | lysine 2 3-aminomutase | 0.67 | 3 |
Not shown: 41 genomes with orthologs for HP15_2221 only; 2 genomes with orthologs for HP15_2514 only