Conservation of cofitness between GFF3239 and GFF2431 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 1.0 GFF2431 Chaperone protein HscA 0.59 12
Escherichia coli ECOR38 0.92 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 HEPCGN_20780 hscA Fe-S protein assembly chaperone HscA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L 0.92 OHPLBJKB_01183 Chaperone protein HscA
Escherichia coli BW25113 0.92 b0948 ycbY predicted methyltransferase (NCBI) 0.92 b2526 hscA chaperone protein HscA (NCBI)
Escherichia coli BL21 0.92 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent 0.92 ECD_02418 DnaK-like molecular chaperone specific for IscU
Escherichia coli ECRC100 0.92 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 OKFHMN_21640 hscA Fe-S protein assembly chaperone HscA
Escherichia coli ECRC102 0.92 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 NIAGMN_19410 hscA Fe-S protein assembly chaperone HscA
Escherichia coli ECRC101 0.92 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 MCAODC_12170 hscA Fe-S protein assembly chaperone HscA
Escherichia coli ECRC99 0.92 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 KEDOAH_06580 hscA Fe-S protein assembly chaperone HscA
Escherichia coli ECRC62 0.92 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 BNILDI_12110 hscA Fe-S protein assembly chaperone HscA
Escherichia coli ECOR27 0.92 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 NOLOHH_13310 hscA Fe-S protein assembly chaperone HscA low > 75
Escherichia coli ECRC98 0.92 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 JDDGAC_25315 hscA Fe-S protein assembly chaperone HscA
Escherichia coli Nissle 1917 0.92 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.92 ECOLIN_RS14345 Fe-S protein assembly chaperone HscA low > 55
Escherichia fergusonii Becca 0.92 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L 0.92 EFB2_01364 Chaperone protein HscA low > 86
Enterobacter sp. TBS_079 0.88 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L 0.88 MPMX20_03407 Chaperone protein HscA low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase 0.88 EX28DRAFT_0114 Fe-S protein assembly chaperone HscA
Klebsiella michiganensis M5al 0.87 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase 0.87 BWI76_RS21140 molecular chaperone HscA low > 92
Pectobacterium carotovorum WPP14 0.78 HER17_RS11990 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.81 HER17_RS06035 Fe-S protein assembly chaperone HscA low > 75
Serratia liquefaciens MT49 0.78 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 IAI46_19335 Fe-S protein assembly chaperone HscA low > 86
Dickeya dadantii 3937 0.77 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.81 DDA3937_RS15525 Fe-S protein assembly chaperone HscA
Dickeya dianthicola ME23 0.77 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.79 DZA65_RS16700 Fe-S protein assembly chaperone HscA
Dickeya dianthicola 67-19 0.77 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.80 HGI48_RS15625 Fe-S protein assembly chaperone HscA
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L 0.73 CSW01_03905 chaperone protein HscA
Shewanella amazonensis SB2B 0.50 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.69 Sama_1297 hscA chaperone protein HscA (RefSeq)
Shewanella loihica PV-4 0.48 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.66 Shew_2313 hscA chaperone protein HscA (RefSeq)
Shewanella oneidensis MR-1 0.48 SO1851 conserved hypothetical protein (NCBI ptt file) 0.68 SO2268 hscA chaperone protein HscA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.47 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.68 Shewana3_2276 hscA chaperone protein HscA (RefSeq)
Pseudomonas stutzeri RCH2 0.43 Psest_1949 Predicted N6-adenine-specific DNA methylase 0.61 Psest_1255 Fe-S protein assembly chaperone HscA
Pseudomonas putida KT2440 0.43 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.63 PP_0846 DnaK-like molecular chaperone specific for IscU low > 96
Pseudomonas sp. S08-1 0.43 OH686_03110 23S rRNA (guanine(2445)-N(2))-methyltransferase / 23S rRNA (guanine(2069)-N(7))-methyltransferase 0.61 OH686_17495 Fe-S protein assembly chaperone HscA
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.62 PFLU_RS24835 Fe-S protein assembly chaperone HscA
Pseudomonas simiae WCS417 0.41 PS417_20930 50S rRNA methyltransferase 0.62 PS417_23180 chaperone protein HscA
Pseudomonas fluorescens SBW25 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.62 PFLU_RS24835 Fe-S protein assembly chaperone HscA
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase 0.62 Psyr_1241 Fe-S protein assembly chaperone HscA
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase 0.62 Psyr_1241 Fe-S protein assembly chaperone HscA
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3844 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.61 Pf1N1B4_861 Chaperone protein HscA
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4094 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.61 PfGW456L13_4869 Chaperone protein HscA
Pseudomonas sp. RS175 0.41 PFR28_01055 Ribosomal RNA large subunit methyltransferase K/L 0.61 PFR28_00290 Chaperone protein HscA
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_00775 50S rRNA methyltransferase 0.61 AO353_15855 chaperone protein HscA
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_02605 50S rRNA methyltransferase 0.62 AO356_06625 chaperone protein HscA
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2346 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.62 Pf6N2E2_3185 Chaperone protein HscA
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_2229 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52) 0.63 B158DRAFT_1463 Fe-S protein assembly chaperone HscA low > 40
Acinetobacter radioresistens SK82 0.38 MPMX26_01097 Ribosomal RNA large subunit methyltransferase K/L 0.49 MPMX26_01323 Chaperone protein HscA

Not shown: 11 genomes with orthologs for GFF3239 only; 20 genomes with orthologs for GFF2431 only