Conservation of cofitness between PS417_23415 and PS417_11860 in Pseudomonas simiae WCS417

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23415 AraC family transcriptional regulator 1.0 PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) 0.33 9
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS25245 helix-turn-helix transcriptional regulator 0.98 PFLU_RS12595 5-deoxy-glucuronate isomerase low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS25245 helix-turn-helix transcriptional regulator 0.98 PFLU_RS12595 5-deoxy-glucuronate isomerase low > 109
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_04870 AraC family transcriptional regulator 0.86 AO353_21345 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_1007 Transcriptional regulator, AraC family 0.87 Pf1N1B4_4276 5-deoxy-glucuronate isomerase (EC 5.3.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_16915 AraC family transcriptional regulator 0.87 AO356_23170 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) low > 104
Pseudomonas sp. RS175 0.79 PFR28_00233 HTH-type transcriptional activator RhaS 0.86 PFR28_02423 5-deoxy-glucuronate isomerase low > 88
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_5308 Transcriptional regulator, AraC family 0.86 Pf6N2E2_514 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) low > 103
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_1041 transcriptional regulator, AraC family 0.77 Psyr_3272 5-deoxyglucuronate isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_1041 transcriptional regulator, AraC family 0.77 Psyr_3272 5-deoxyglucuronate isomerase low > 86
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_03562 AraC family transcriptional regulator 0.62 H281DRAFT_04456 5-deoxyglucuronate isomerase low > 103
Paraburkholderia graminis OAS925 0.44 ABIE53_004694 AraC family transcriptional regulator 0.63 ABIE53_002952 5-deoxy-glucuronate isomerase low > 113
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS17030 AraC family transcriptional regulator 0.62 QEN71_RS05045 5-deoxy-glucuronate isomerase low > 153
Ralstonia solanacearum PSI07 0.43 RPSI07_RS05325 AraC family transcriptional regulator 0.55 RPSI07_RS17885 5-deoxy-glucuronate isomerase low > 81
Ralstonia solanacearum GMI1000 0.43 RS_RS22710 AraC family transcriptional regulator 0.52 RS_RS06200 5-deoxy-glucuronate isomerase low > 80
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS34420 AraC family transcriptional regulator 0.62 BPHYT_RS13925 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) low > 109
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS18275 AraC family transcriptional regulator 0.54 RALBFv3_RS15470 5-deoxy-glucuronate isomerase low > 76
Ralstonia solanacearum UW163 0.43 UW163_RS20855 AraC family transcriptional regulator 0.54 UW163_RS12930 5-deoxy-glucuronate isomerase — —
Enterobacter sp. TBS_079 0.34 MPMX20_02241 HTH-type transcriptional activator RhaS 0.49 MPMX20_03366 5-deoxy-glucuronate isomerase low > 85
Klebsiella michiganensis M5al 0.34 BWI76_RS13355 AraC family transcriptional regulator 0.47 BWI76_RS03075 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) low > 92
Pectobacterium carotovorum WPP14 0.32 HER17_RS13315 AraC family transcriptional regulator 0.46 HER17_RS14390 5-deoxy-glucuronate isomerase low > 75
Enterobacter asburiae PDN3 0.32 EX28DRAFT_1225 Helix-turn-helix domain 0.49 EX28DRAFT_0156 Uncharacterized enzyme involved in inositol metabolism low > 76
Pantoea sp. MT58 0.32 IAI47_05640 helix-turn-helix transcriptional regulator 0.45 IAI47_01470 5-deoxy-glucuronate isomerase low > 76
Serratia liquefaciens MT49 0.32 IAI46_11980 helix-turn-helix transcriptional regulator 0.46 IAI46_24015 5-deoxy-glucuronate isomerase low > 86
Dickeya dadantii 3937 0.32 DDA3937_RS08700 helix-turn-helix domain-containing protein 0.46 DDA3937_RS03735 5-deoxy-glucuronate isomerase low > 74
Dickeya dianthicola 67-19 0.29 HGI48_RS08795 helix-turn-helix transcriptional regulator 0.46 HGI48_RS03775 5-deoxy-glucuronate isomerase low > 71
Dickeya dianthicola ME23 0.29 DZA65_RS09100 helix-turn-helix transcriptional regulator 0.46 DZA65_RS03900 5-deoxy-glucuronate isomerase low > 75
Dinoroseobacter shibae DFL-12 0.16 Dshi_2282 transcriptional regulator, AraC family (RefSeq) 0.44 Dshi_1279 Myo-inositol catabolism IolB domain protein (RefSeq) low > 64

Not shown: 7 genomes with orthologs for PS417_23415 only; 11 genomes with orthologs for PS417_11860 only