Conservation of cofitness between Psest_2018 and Psest_2307 in Pseudomonas stutzeri RCH2

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2018 Uncharacterized conserved protein 1.0 Psest_2307 Universal stress protein UspA and related nucleotide-binding proteins 0.30 14
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_27720 cupin 0.75 AO353_22950 universal stress protein UspA low > 101
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_22095 cupin 0.68 AO356_24400 universal stress protein UspA low > 104
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_283 FIG002776: hypothetical protein 0.69 Pf6N2E2_567 Universal stress protein family 7 — —
Pseudomonas sp. RS175 0.83 PFR28_02622 50S ribosomal protein L16 3-hydroxylase 0.68 PFR28_02374 Universal stress protein E — —
Pseudomonas fluorescens SBW25 0.83 PFLU_RS18595 cupin domain-containing protein 0.72 PFLU_RS17010 universal stress protein A low > 109
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS18595 cupin domain-containing protein 0.72 PFLU_RS17010 universal stress protein A low > 109
Pseudomonas sp. S08-1 0.83 OH686_00190 hypothetical protein 0.75 OH686_03960 Universal stress protein family 7 — —
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_2636 FIG002776: hypothetical protein 0.70 PfGW456L13_3376 Universal stress protein family 7 — —
Pseudomonas simiae WCS417 0.82 PS417_16555 cupin 0.72 PS417_14980 universal stress protein UspA low > 88
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_4045 FIG002776: hypothetical protein 0.73 Pf1N1B4_4566 Universal stress protein family 7 — —
Pseudomonas putida KT2440 0.78 PP_4017 conserved protein of unknown function 0.63 PP_2187 Universal stress protein family — —
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1802 Uncharacterized conserved protein 0.24 EX28DRAFT_1542 Universal stress protein UspA and related nucleotide-binding proteins low > 76
Escherichia coli BW25113 0.32 b1128 ycfD orf, hypothetical protein (VIMSS) 0.24 b1333 uspE stress-induced protein (NCBI) low > 76
Escherichia coli ECRC62 0.32 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 BNILDI_18095 uspE universal stress protein UspE — —
Escherichia fergusonii Becca 0.32 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.24 EFB2_02594 Universal stress protein E 0.29 67
Escherichia coli Nissle 1917 0.32 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 ECOLIN_RS08000 universal stress protein UspE — —
Escherichia coli ECOR38 0.32 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 HEPCGN_25920 uspE universal stress protein UspE low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.24 OHPLBJKB_02349 Universal stress protein E low > 73
Escherichia coli BL21 0.32 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.24 ECD_01310 stress-induced protein low > 60
Escherichia coli ECOR27 0.32 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 NOLOHH_19945 uspE universal stress protein UspE — —
Enterobacter sp. TBS_079 0.32 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.24 MPMX20_02033 Universal stress protein E low > 85
Escherichia coli ECRC99 0.32 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 KEDOAH_26525 uspE universal stress protein UspE — —
Escherichia coli ECRC98 0.32 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 JDDGAC_04790 uspE universal stress protein UspE — —
Escherichia coli ECRC101 0.32 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 MCAODC_16025 uspE universal stress protein UspE — —
Escherichia coli ECRC102 0.32 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 NIAGMN_26415 uspE universal stress protein UspE — —
Escherichia coli ECRC101 0.32 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 OKFHMN_02245 uspE universal stress protein UspE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3413 FIG002776: hypothetical protein 0.24 GFF2657 Universal stress protein E low > 78
Klebsiella michiganensis M5al 0.31 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.25 BWI76_RS16190 universal stress protein UspE — —
Pectobacterium carotovorum WPP14 0.31 HER17_RS19385 cupin domain-containing protein 0.23 HER17_RS10520 universal stress protein UspE low > 75
Dickeya dadantii 3937 0.31 DDA3937_RS11510 cupin domain-containing protein 0.23 DDA3937_RS10955 universal stress protein UspE low > 74
Erwinia tracheiphila SCR3 0.31 LU632_RS14600 cupin domain-containing protein 0.23 LU632_RS11425 uspE universal stress protein UspE low > 74
Shewanella oneidensis MR-1 0.31 SO2636 conserved hypothetical protein (NCBI ptt file) 0.25 SO2355 universal stress protein family (NCBI ptt file) — —
Serratia liquefaciens MT49 0.31 IAI46_10385 cupin domain-containing protein 0.23 IAI46_13265 universal stress protein UspE low > 86
Rahnella sp. WP5 0.31 EX31_RS23850 cupin domain-containing protein 0.24 EX31_RS07205 universal stress protein UspE low > 89
Dickeya dianthicola 67-19 0.31 HGI48_RS14985 cupin domain-containing protein 0.23 HGI48_RS10905 universal stress protein UspE low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS15735 cupin domain-containing protein 0.23 DZA65_RS11365 universal stress protein UspE low > 75
Shewanella loihica PV-4 0.30 Shew_1557 cupin 4 family protein (RefSeq) 0.25 Shew_1994 universal stress protein UspE (RefSeq) low > 60
Pantoea sp. MT58 0.30 IAI47_11940 cupin domain-containing protein 0.22 IAI47_09575 universal stress protein UspE low > 76
Shewanella sp. ANA-3 0.29 Shewana3_1744 cupin 4 family protein (RefSeq) 0.25 Shewana3_2116 universal stress protein UspE (RefSeq) — —
Shewanella amazonensis SB2B 0.27 Sama_2065 cupin 4 (RefSeq) 0.26 Sama_1800 universal stress protein UspE (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.25 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.23 MIT1002_02138 Universal stress protein E low > 70

Not shown: 11 genomes with orthologs for Psest_2018 only; 2 genomes with orthologs for Psest_2307 only