Conservation of cofitness between Psest_3803 and Psest_2133 in Pseudomonas stutzeri RCH2

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3803 DNA repair protein radc 1.0 Psest_2133 Uncharacterized protein conserved in bacteria 0.19 19
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_09220 hypothetical protein 0.57 AO353_27860 hypothetical protein low > 101
Pseudomonas sp. RS175 0.84 PFR28_04412 hypothetical protein 0.58 PFR28_02751 Translocation and assembly module subunit TamB low > 88
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2126 DNA repair protein RadC 0.59 Pf1N1B4_3998 putative exported protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_12545 hypothetical protein 0.58 AO356_01045 hypothetical protein low > 104
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS29445 JAB domain-containing protein 0.56 PFLU_RS18915 translocation/assembly module TamB low > 109
Pseudomonas fluorescens SBW25 0.81 PFLU_RS29445 JAB domain-containing protein 0.56 PFLU_RS18915 translocation/assembly module TamB low > 109
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_4377 DNA repair protein RadC 0.58 Pf6N2E2_145 putative exported protein low > 103
Pseudomonas simiae WCS417 0.80 PS417_27770 hypothetical protein 0.56 PS417_16965 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0222 DNA replication and repair protein RadC 0.56 Psyr_2479 Protein of unknown function DUF490 low > 86
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_798 DNA repair protein RadC 0.57 PfGW456L13_2602 putative exported protein low > 87
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0222 DNA replication and repair protein RadC 0.56 Psyr_2479 Protein of unknown function DUF490 low > 86
Pseudomonas putida KT2440 0.71 PP_5284 UPF0758 protein PP_5284 0.54 PP_2893 conserved exported protein of unknown function low > 96
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_01155 DNA repair protein RadC 0.16 CSW01_12900 DUF490 domain-containing protein low > 62
Shewanella amazonensis SB2B 0.60 Sama_0327 radC DNA repair protein RadC (RefSeq) 0.13 Sama_1615 hypothetical protein (RefSeq) low > 62
Marinobacter adhaerens HP15 0.58 HP15_3321 DNA repair protein RadC-like protein 0.36 HP15_2340 protein containing DUF490 low > 73
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.4897.1 DNA repair protein RadC 0.09 Xcc-8004.5192.1 hypothetical protein low > 74
Alteromonas macleodii MIT1002 0.54 MIT1002_00049 DNA repair protein RadC 0.11 MIT1002_04049 Autotransporter assembly factor TamB low > 70
Lysobacter sp. OAE881 0.52 ABIE51_RS00095 DNA repair protein RadC 0.10 ABIE51_RS01230 translocation/assembly module TamB domain-containing protein 0.50 20
Dickeya dianthicola ME23 0.52 DZA65_RS00755 JAB domain-containing protein 0.15 DZA65_RS18290 translocation/assembly module TamB low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS00700 DNA repair protein RadC 0.15 HGI48_RS17210 translocation/assembly module TamB low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF371 DNA repair protein RadC 0.16 GFF875 Uncharacterized protein YtfN low > 78
Dickeya dadantii 3937 0.51 DDA3937_RS20515 DNA repair protein RadC 0.14 DDA3937_RS17155 translocation/assembly module TamB low > 74
Escherichia coli ECRC101 0.51 OKFHMN_15620 radC DNA repair protein RadC 0.16 OKFHMN_11995 tamB autotransporter assembly complex protein TamB — —
Escherichia coli ECRC99 0.51 KEDOAH_12530 radC DNA repair protein RadC 0.16 KEDOAH_16160 tamB autotransporter assembly complex protein TamB — —
Escherichia coli ECOR27 0.51 NOLOHH_07500 radC DNA repair protein RadC 0.16 NOLOHH_04255 tamB autotransporter assembly complex protein TamB low > 57
Escherichia coli ECRC102 0.51 NIAGMN_13380 radC DNA repair protein RadC 0.16 NIAGMN_09845 tamB autotransporter assembly complex protein TamB — —
Escherichia coli BW25113 0.51 b3638 radC DNA repair protein (VIMSS) 0.16 b4221 ytfN hypothetical protein (NCBI) low > 76
Escherichia coli ECRC98 0.51 JDDGAC_19245 radC DNA repair protein RadC 0.16 JDDGAC_15635 tamB autotransporter assembly complex protein TamB — —
Escherichia fergusonii Becca 0.51 EFB2_00175 hypothetical protein 0.16 EFB2_04308 Translocation and assembly module subunit TamB low > 86
Escherichia coli ECRC62 0.51 BNILDI_04015 radC DNA repair protein RadC 0.16 BNILDI_07260 tamB autotransporter assembly complex protein TamB — —
Escherichia coli ECRC101 0.51 MCAODC_06130 radC DNA repair protein RadC 0.16 MCAODC_02510 tamB autotransporter assembly complex protein TamB — —
Escherichia coli ECOR38 0.51 HEPCGN_14445 radC DNA repair protein RadC 0.16 HEPCGN_10195 tamB autotransporter assembly complex protein TamB low > 85
Escherichia coli Nissle 1917 0.51 ECOLIN_RS20730 DNA repair protein RadC 0.16 ECOLIN_RS24515 autotransporter assembly complex protein TamB low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00064 hypothetical protein 0.16 OHPLBJKB_03812 Translocation and assembly module subunit TamB low > 73
Escherichia coli BL21 0.50 ECD_03495 UPF0758 family protein 0.16 ECD_04092 translocation and assembly module for autotransporter export, inner membrane subunit low > 60
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3888 DNA repair protein radc 0.16 EX28DRAFT_3407 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_00097 hypothetical protein 0.16 MPMX20_00504 Translocation and assembly module subunit TamB low > 85
Klebsiella michiganensis M5al 0.46 BWI76_RS27365 hypothetical protein 0.16 BWI76_RS02780 translocation and assembly module TamB low > 92
Erwinia tracheiphila SCR3 0.44 LU632_RS21995 radC DNA repair protein RadC 0.16 LU632_RS02110 translocation/assembly module TamB low > 74

Not shown: 52 genomes with orthologs for Psest_3803 only; 0 genomes with orthologs for Psest_2133 only