Conservation of cofitness between GFF774 and GFF2030 in Hydrogenophaga sp. GW460-11-11-14-LB1

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF774 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 1.0 GFF2030 Aldehyde dehydrogenase (EC 1.2.1.3) 0.55 8
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1224 Vfr transcriptional regulator / Cyclic AMP receptor protein 0.60 PfGW456L13_805 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) low > 87
Marinobacter adhaerens HP15 0.27 HP15_3307 transcriptional regulator, Crp/Fnr family 0.61 HP15_943 aldehyde dehydrogenase family protein low > 73
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2551 Vfr transcriptional regulator / Cyclic AMP receptor protein 0.60 Pf1N1B4_2132 Aldehyde dehydrogenase (EC 1.2.1.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_07200 cyclic AMP receptor protein 0.61 AO353_09195 aldehyde dehydrogenase low > 101
Pseudomonas sp. S08-1 0.27 OH686_15145 Cyclic AMP receptor protein 0.60 OH686_13645 Aldehyde dehydrogenase low > 80
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS27355 cAMP-activated global transcriptional regulator CRP 0.62 PFLU_RS29420 aldehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS27355 cAMP-activated global transcriptional regulator CRP 0.62 PFLU_RS29420 aldehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4828 Vfr transcriptional regulator / Cyclic AMP receptor protein 0.61 Pf6N2E2_4383 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) 0.23 40
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_14450 cyclic AMP receptor protein 0.61 AO356_12580 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) low > 104
Pseudomonas putida KT2440 0.26 PP_0424 DNA-binding transcriptional dual regulator 0.61 PP_5278 4-guanidinobutyraldehyde dehydrogenase low > 96
Pseudomonas sp. RS175 0.26 PFR28_04041 Cyclic AMP receptor-like protein 0.61 PFR28_04407 NADP/NAD-dependent aldehyde dehydrogenase PuuC low > 88
Pseudomonas simiae WCS417 0.26 PS417_25700 cyclic AMP receptor protein 0.62 PS417_27745 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) low > 88
Pseudomonas stutzeri RCH2 0.25 Psest_3646 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 0.61 Psest_4305 NAD-dependent aldehyde dehydrogenases low > 67
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_4577 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp 0.61 Psyr_0227 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_4577 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp 0.61 Psyr_0227 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase low > 86
Enterobacter asburiae PDN3 0.23 EX28DRAFT_4172 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 0.51 EX28DRAFT_1501 NAD-dependent aldehyde dehydrogenases — —
Klebsiella michiganensis M5al 0.23 BWI76_RS25990 cAMP-activated global transcriptional regulator CRP 0.53 BWI76_RS10695 aldehyde dehydrogenase PuuC — —
Escherichia coli ECRC101 0.23 OKFHMN_17240 crp cAMP-activated global transcriptional regulator CRP 0.51 OKFHMN_02430 puuC aldehyde dehydrogenase PuuC — —
Escherichia coli ECOR27 0.23 NOLOHH_09040 crp cAMP-activated global transcriptional regulator CRP 0.52 NOLOHH_20115 puuC aldehyde dehydrogenase PuuC — —
Escherichia coli ECRC98 0.23 JDDGAC_20870 crp cAMP-activated global transcriptional regulator CRP 0.51 JDDGAC_04975 puuC aldehyde dehydrogenase PuuC — —
Escherichia coli ECRC62 0.23 BNILDI_02480 crp cAMP-activated global transcriptional regulator CRP 0.52 BNILDI_18265 puuC aldehyde dehydrogenase PuuC — —
Escherichia coli BL21 0.23 ECD_03208 cAMP-activated global transcription factor, mediator of catabolite repression 0.52 ECD_01277 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.23 MCAODC_07770 crp cAMP-activated global transcriptional regulator CRP 0.51 MCAODC_15840 puuC aldehyde dehydrogenase PuuC — —
Escherichia coli ECRC99 0.23 KEDOAH_10900 crp cAMP-activated global transcriptional regulator CRP 0.51 KEDOAH_26345 puuC aldehyde dehydrogenase PuuC — —
Serratia liquefaciens MT49 0.23 IAI46_23580 cAMP-activated global transcriptional regulator CRP 0.55 IAI46_10545 aldehyde dehydrogenase PuuC — —
Escherichia coli ECOR38 0.23 HEPCGN_16065 crp cAMP-activated global transcriptional regulator CRP 0.51 HEPCGN_25770 puuC aldehyde dehydrogenase PuuC — —
Escherichia coli BW25113 0.23 b3357 crp DNA-binding transcriptional dual regulator (NCBI) 0.52 b1300 puuC gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00345 cAMP-activated global transcriptional regulator CRP 0.52 OHPLBJKB_02382 NADP/NAD-dependent aldehyde dehydrogenase PuuC — —
Escherichia coli ECRC102 0.23 NIAGMN_15010 crp cAMP-activated global transcriptional regulator CRP 0.51 NIAGMN_26600 puuC aldehyde dehydrogenase PuuC — —
Shewanella loihica PV-4 0.22 Shew_0585 cAMP-regulatory protein (RefSeq) 0.59 Shew_0967 aldehyde dehydrogenase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.22 SO0624 crp catabolite gene activator (NCBI ptt file) 0.60 SO3496 aldehyde dehydrogenase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.22 Shewana3_0617 cAMP-regulatory protein (RefSeq) 0.60 Shewana3_3105 aldehyde dehydrogenase (acceptor) (RefSeq) — —
Shewanella amazonensis SB2B 0.22 Sama_3004 cAMP-regulatory protein (RefSeq) 0.62 Sama_2648 aldehyde dehydrogenase (RefSeq) low > 62
Agrobacterium fabrum C58 0.20 Atu4380 Crp family transcriptional regulator 0.46 Atu3959 aldehyde dehydrogenase low > 89
Castellaniella sp019104865 MT123 0.18 ABCV34_RS13935 Crp/Fnr family transcriptional regulator 0.43 ABCV34_RS10205 aldehyde dehydrogenase low > 48
Rhodospirillum rubrum S1H 0.12 Rru_A1245 Transcriptional Regulator, Crp/Fnr family (NCBI) 0.55 Rru_A0298 Aldehyde dehydrogenase (NAD+) (NCBI) low > 58

Not shown: 29 genomes with orthologs for GFF774 only; 9 genomes with orthologs for GFF2030 only