| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF4646 | | Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) | 1.0 | GFF1883 | | NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) | 0.77 | 7 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.97 | OHPLBJKB_02981 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | 0.97 | OHPLBJKB_01426 | | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli ECRC98 | 0.97 | JDDGAC_10500 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | JDDGAC_26845 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli ECOR27 | 0.97 | NOLOHH_23280 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | NOLOHH_14500 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli Nissle 1917 | 0.97 | ECOLIN_RS03900 | | cytochrome ubiquinol oxidase subunit I | 0.97 | ECOLIN_RS13245 | | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli ECRC62 | 0.97 | BNILDI_21275 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | BNILDI_13420 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli ECRC101 | 0.97 | MCAODC_26065 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | MCAODC_13920 | nuoJ | NADH-quinone oxidoreductase subunit J | low | > 87 |
| Escherichia coli ECRC102 | 0.97 | NIAGMN_04895 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | NIAGMN_20650 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli BL21 | 0.97 | ECD_00692 | | cytochrome d terminal oxidase, subunit I | 0.97 | ECD_02205 | | NADH:ubiquinone oxidoreductase, membrane subunit J | — | — |
| Escherichia coli ECRC99 | 0.97 | KEDOAH_21120 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | KEDOAH_05315 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli ECRC100 | 0.97 | OKFHMN_06845 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | OKFHMN_22880 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli ECOR38 | 0.97 | HEPCGN_01425 | cydA | cytochrome ubiquinol oxidase subunit I | 0.97 | HEPCGN_22085 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Escherichia coli BW25113 | 0.97 | b0733 | cydA | cytochrome d terminal oxidase, polypeptide subunit I (VIMSS) | 0.97 | b2280 | nuoJ | NADH dehydrogenase subunit J (NCBI) | — | — |
| Escherichia fergusonii Becca | 0.97 | EFB2_03374 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | 0.97 | EFB2_01579 | | NADH-quinone oxidoreductase subunit J | — | — |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_2259 | | Cytochrome bd-type quinol oxidase, subunit 1 | 0.95 | EX28DRAFT_0330 | | NADH:ubiquinone oxidoreductase subunit 6 (chain J) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_01361 | | Cytochrome bd-I ubiquinol oxidase subunit 1 | 0.96 | MPMX20_03210 | | NADH-quinone oxidoreductase subunit J | low | > 85 |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS08495 | | cytochrome bd-I ubiquinol oxidase subunit I | 0.91 | BWI76_RS20150 | | NADH:ubiquinone oxidoreductase subunit J | 0.36 | 22 |
| Pantoea sp. MT58 | 0.91 | IAI47_13725 | | cytochrome ubiquinol oxidase subunit I | 0.80 | IAI47_06400 | | NADH-quinone oxidoreductase subunit J | low | > 76 |
| Serratia liquefaciens MT49 | 0.90 | IAI46_06295 | | cytochrome ubiquinol oxidase subunit I | 0.72 | IAI46_17670 | | NADH-quinone oxidoreductase subunit J | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.88 | HER17_RS14905 | | cytochrome ubiquinol oxidase subunit I | 0.75 | HER17_RS07165 | | NADH-quinone oxidoreductase subunit J | — | — |
| Dickeya dianthicola 67-19 | 0.87 | HGI48_RS06520 | | cytochrome ubiquinol oxidase subunit I | 0.74 | HGI48_RS14270 | | NADH-quinone oxidoreductase subunit J | — | — |
| Dickeya dianthicola ME23 | 0.87 | DZA65_RS06870 | | cytochrome ubiquinol oxidase subunit I | 0.73 | DZA65_RS14945 | | NADH-quinone oxidoreductase subunit J | — | — |
| Dickeya dadantii 3937 | 0.87 | DDA3937_RS06480 | | cytochrome ubiquinol oxidase subunit I | 0.75 | DDA3937_RS14295 | | NADH-quinone oxidoreductase subunit J | — | — |
| Erwinia tracheiphila SCR3 | 0.86 | LU632_RS16065 | cydA | cytochrome ubiquinol oxidase subunit I | 0.79 | LU632_RS08005 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Rahnella sp. WP5 | 0.86 | EX31_RS23460 | | cytochrome ubiquinol oxidase subunit I | 0.75 | EX31_RS19395 | | NADH-quinone oxidoreductase subunit J | 0.68 | 18 |
| Shewanella oneidensis MR-1 | 0.74 | SO3286 | cydA | cytochrome d ubiquinol oxidase, subunit I (NCBI ptt file) | 0.54 | SO1013 | nuoJ | NADH dehydrogenase I, J subunit (NCBI ptt file) | 0.33 | 57 |
| Acinetobacter radioresistens SK82 | 0.73 | MPMX26_01623 | | Cytochrome bd ubiquinol oxidase subunit 1 | 0.48 | MPMX26_02547 | | NADH-quinone oxidoreductase subunit J | — | — |
| Herbaspirillum seropedicae SmR1 | 0.68 | HSERO_RS15340 | | cytochrome BD oxidase subunit I | 0.23 | HSERO_RS08865 | | NADH:ubiquinone oxidoreductase subunit J | — | — |
| Burkholderia phytofirmans PsJN | 0.67 | BPHYT_RS02765 | | cytochrome BD oxidase subunit I | 0.20 | BPHYT_RS06670 | | NADH:ubiquinone oxidoreductase subunit J | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS01615 | | cytochrome ubiquinol oxidase subunit I | 0.20 | QEN71_RS24105 | | NADH-quinone oxidoreductase subunit J | — | — |
| Variovorax sp. SCN45 | 0.60 | GFF2653 | | Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) | 0.21 | GFF4759 | | NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.60 | Xcc-8004.2333.1 | | Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) | 0.19 | Xcc-8004.1992.1 | | NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) | — | — |
| Dechlorosoma suillum PS | 0.59 | Dsui_1915 | | cytochrome bd-type quinol oxidase, subunit 1 | 0.22 | Dsui_3041 | | NADH:ubiquinone oxidoreductase subunit 6 (chain J) | — | — |
| Rhizobium sp. OAE497 | 0.59 | ABIE40_RS20490 | | cytochrome ubiquinol oxidase subunit I | 0.18 | ABIE40_RS07230 | | NADH-quinone oxidoreductase subunit J | — | — |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS11435 | | cytochrome ubiquinol oxidase subunit I | 0.14 | LRK55_RS00860 | | NADH-quinone oxidoreductase subunit J | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS11710 | | cytochrome ubiquinol oxidase subunit I | 0.14 | LRK54_RS01085 | | NADH-quinone oxidoreductase subunit J | — | — |
| Rhodanobacter sp. FW510-T8 | 0.59 | OKGIIK_12185 | appC | cytochrome d terminal oxidase subunit 1 | 0.18 | OKGIIK_05810 | nuoJ | NADH-quinone oxidoreductase subunit J | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS11955 | | cytochrome ubiquinol oxidase subunit I | 0.18 | ABZR86_RS06070 | | NADH-quinone oxidoreductase subunit J | — | — |
| Agrobacterium fabrum C58 | 0.57 | Atu4091 | | cytochrome d oxidase | 0.18 | Atu1279 | | NADH ubiquinone oxidoreductase chain J | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_00800 | | cytochrome bd-type quinol oxidase, subunit 1 cydA | 0.15 | CCNA_02019 | | NADH-quinone oxidoreductase chain J | — | — |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_00800 | | cytochrome bd-type quinol oxidase, subunit 1 cydA | 0.15 | CCNA_02019 | | NADH-quinone oxidoreductase chain J | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.56 | Ga0059261_3824 | | Bacterial Cytochrome Ubiquinol Oxidase | 0.20 | Ga0059261_0700 | | NADH:ubiquinone oxidoreductase subunit 6 (chain J) | — | — |
| Bacteroides stercoris CC31F | 0.37 | HMPREF1181_RS12460 | | cytochrome ubiquinol oxidase subunit I | 0.15 | HMPREF1181_RS09025 | | NADH-quinone oxidoreductase subunit J | low | > 56 |